RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 A0A1B0GVI7 797 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 A0A1B0GW55 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ANKRD61A6NGH8 418 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 M0R1W7 72 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 GATBO75879 557 aaKnown RBP8.16□□□□□ -1.1
SKA2-208ENST00000583927 APOL3O95236 402 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 IGHA1P01876 353 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 SFTPBP07988 381 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L2P0CJ85 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L3P0CJ86 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L4P0CJ87 422 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L5P0CJ88 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L6P0CJ89 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L7P0CJ90 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 HKR1P10072 659 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 HAAOP46952 286 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 FUT6P51993 359 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ACTA2P62736 377 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ACTG2P63267 376 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 RAB40BQ12829 278 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 IL24Q13007 206 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 MRPL28Q13084 256 aaKnown RBP8.16□□□□□ -1.1
SKA2-208ENST00000583927 ZIK1Q3SY52 487 aaPredicted RBP8.16□□□□□ -1.1
SKA2-208ENST00000583927 LPCAT4Q643R3 524 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
SKA2-208ENST00000583927 ACP7Q6ZNF0 438 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 CMTM4Q8IZR5 234 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 SYS1Q8N2H4 156 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 TMEM86BQ8N661 226 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DNAAF1Q8NEP3 725 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 OR2G2Q8NGZ5 317 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 HAVCR2Q8TDQ0 301 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 GATAD2BQ8WXI9 593 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ST8SIA4Q92187 359 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 SLC25A28Q96A46 364 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 RNFT2Q96EX2 444 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 NRIP2Q9BQI9 281 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 CHST5Q9GZS9 411 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 PLEKHA1Q9HB21 404 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 ACOXLQ9NUZ1 547 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 FAM118AQ9NWS6 357 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 DUX4Q9UBX2 424 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 SLC25A10Q9UBX3 287 aaPredicted RBP8.16□□□□□ -1.1
SKA2-208ENST00000583927 GNG8Q9UK08 70 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 SLC7A11Q9UPY5 501 aa8.16□□□□□ -1.1
SKA2-208ENST00000583927 IGHV1-69DA0A0B4J2H0 117 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 RGS9O75916 674 aaPredicted RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 FADS2O95864 444 aaKnown RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 SERPINA3P01011 423 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 IGHV1-69P01742 117 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 DBTP11182 482 aaKnown RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 KIR3DL2P43630 455 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 RPL15P61313 204 aaKnown RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 ARF6P62330 175 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 ACTG1P63261 375 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 ELF3P78545 371 aaPredicted RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 ZNF91Q05481 1191 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 BAMBIQ13145 260 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 GALEQ14376 348 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 UBE2V2Q15819 145 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 DGUOKQ16854 277 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 C12orf54Q6X4T0 127 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 Q6YL49 198 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 UTS2BQ765I0 119 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 ZNF561Q8N587 486 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 OR5T2Q8NGG2 359 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.1
SKA2-208ENST00000583927 LGALS12Q96DT0 336 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 ZNF649Q9BS31 505 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 PCGF1Q9BSM1 259 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 ADI1Q9BV57 179 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 JAM3Q9BX67 310 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 GPR173Q9NS66 373 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 SNTG1Q9NSN8 517 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 FRRS1LQ9P0K9 344 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 BOLA1Q9Y3E2 137 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 MAB21L2Q9Y586 359 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 POMT1Q9Y6A1 747 aa8.15□□□□□ -1.1
SKA2-208ENST00000583927 CMYA5Q8N3K9 4069 aa8.15□□□□□ -1.11
SKA2-208ENST00000583927 LOC107986453A0A1B0GWG9 222 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 SYNGR1O43759 233 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 ALX3O95076 343 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 MT-ND2P03891 347 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 HTR1AP08908 422 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 SELLP14151 372 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 OR12D2P58182 307 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 FOXL1Q12952 345 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 IKZF1Q13422 519 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 CNN3Q15417 329 aaKnown RBP8.14□□□□□ -1.11
SKA2-208ENST00000583927 SLC9A3R2Q15599 337 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 TP53I3Q53FA7 332 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 KLHL22Q53GT1 634 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 BRD3OSQ6XYD6 125 aa8.14□□□□□ -1.11
SKA2-208ENST00000583927 LDLRAD3Q86YD5 345 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms