RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 PCDHGA5Q9Y5G8 931 aa3.95□□□□□ -1.78
PTPRM-215ENST00000583289 PCDHGA1Q9Y5H4 931 aa3.95□□□□□ -1.78
PTPRM-215ENST00000583289 MRPS18BQ9Y676 258 aaKnown RBP3.95□□□□□ -1.78
PTPRM-215ENST00000583289 FREM3P0C091 2139 aa3.95□□□□□ -1.78
PTPRM-215ENST00000583289 EXPH5Q8NEV8 1989 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PI4KAP42356 2102 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PCNX3Q9H6A9 2034 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 CCDC187A0A096LP49 1063 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 IGHV1-45A0A0A0MS14 117 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 IGHV3-20A0A0C4DH32 117 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 A0A1B0GTH9 108 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 A0A1B0GTI1 187 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 KANTRA0A1W2PQU2 76 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 OR5H14A6NHG9 310 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 CEACAM18A8MTB9 384 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TMEM14DPA8MWL7 114 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 LEUTXA8MZ59 168 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 D6RAR5 112 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 RAB27BO00194 218 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 NTN3O00634 580 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 DHHO43323 396 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TRAF3IP2O43734 574 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 EFNA2O43921 213 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ZNF354AO60765 605 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 B3GALNT1O75752 331 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 KDM4BO94953 1096 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MPZL1O95297 269 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 DUS4LO95620 317 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TOMM40O96008 361 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 CRYABP02511 175 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 P04436 131 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 HCKP08631 526 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PET100P0DJ07 73 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 LIFP15018 202 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ANXA7P20073 488 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 CD34P28906 385 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SRD5A2P31213 254 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PMELP40967 661 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PTGDSP41222 190 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MAGEB1P43366 347 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 OR3A2P47893 321 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MLF1P58340 268 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ARPC4P59998 168 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ZP1P60852 638 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 RPS15P62841 145 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 RPS27AP62979 156 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 UBA52P62987 128 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 HIST1H3AP68431 136 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MRPS34P82930 218 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 QRFPP83859 136 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MFGE8Q08431 387 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SPOCK1Q08629 439 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 CHAF1BQ13112 559 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MFAP5Q13361 173 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 EXOSC2Q13868 293 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SGCAQ16586 387 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TMEM128Q5BJH2 165 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 NHLRC3Q5JS37 347 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 RIPPLY2Q5TAB7 128 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 HIST2H3PS2Q5TEC6 136 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MTFR2Q6P444 385 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 GUSBP11Q6P575 273 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 DRAM2Q6UX65 266 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SHISA6Q6ZSJ9 500 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 Q6ZSR3 168 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 FOXL2NBQ6ZUU3 175 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ACOT7LQ6ZUV0 252 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 HIST2H3AQ71DI3 136 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TMUB2Q71RG4 321 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 DPPA2Q7Z7J5 298 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 LYG2Q86SG7 212 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 GPAT4Q86UL3 456 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 COMMD2Q86X83 199 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PDZD9Q8IXQ8 264 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ZNF101Q8IZC7 436 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MAML2Q8IZL2 1156 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 BEST3Q8N1M1 668 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MUC20Q8N307 709 aaPredicted RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 KDM8Q8N371 416 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 FAM89BQ8N5H3 189 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 EIF4E3Q8N5X7 224 aaKnown RBP3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ZNF283Q8N7M2 679 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 WDSUB1Q8N9V3 476 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SLC38A9Q8NBW4 561 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TMEM185AQ8NFB2 350 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 OR11H4Q8NGC9 324 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 OR8S1Q8NH09 359 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 OR4K15Q8NH41 348 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 COQ8AQ8NI60 647 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 MITD1Q8WV92 249 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 TMEM54Q969K7 222 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 SPSB1Q96BD6 273 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ZNF524Q96C55 264 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 NTNG2Q96CW9 530 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 RAB3CQ96E17 227 aa3.94□□□□□ -1.78
PTPRM-215ENST00000583289 PGAM5Q96HS1 289 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms