RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CCDC42Q96M95 316 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 ALS2CR12Q96Q35 445 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 CYTH2Q99418 400 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 SELENOSQ9BQE4 189 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 ANP32EQ9BTT0 268 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 IL22Q9GZX6 179 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 ILKAPQ9H0C8 392 aaPredicted RBP1.75□□□□□ -2.13
COPS3-217ENST00000583160 PCBD2Q9H0N5 130 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 MCCC2Q9HCC0 563 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 ZNHIT6Q9NWK9 470 aaKnown RBP1.75□□□□□ -2.13
COPS3-217ENST00000583160 IFNKQ9P0W0 207 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 XCL2Q9UBD3 114 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 DHCR7Q9UBM7 475 aaKnown RBP1.75□□□□□ -2.13
COPS3-217ENST00000583160 CTSFQ9UBX1 484 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 MEMO1Q9Y316 297 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 IKBKGQ9Y6K9 419 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 EXPH5Q8NEV8 1989 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 NCKAP5O14513 1909 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 MTORP42345 2549 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 NINQ8N4C6 2090 aa1.75□□□□□ -2.13
COPS3-217ENST00000583160 AKAP9Q99996 3911 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 F8WDY8 70 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 H0YGG7 62 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 H0YHG0 523 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 H7C0C1 242 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 OR1I1O60431 355 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 SLC19A2O60779 497 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 SEC22BO75396 215 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 GLSO94925 669 aaPredicted RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 SCELO95171 688 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 BAG2O95816 211 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 IMPDH1P20839 514 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 GCAP28676 217 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 CMPK1P30085 196 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 GRIA1P42261 906 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 ATP5OP48047 213 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 EMP2P54851 167 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 AP1S2P56377 157 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 MLF1P58340 268 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 RPS15AP62244 130 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 SKP1P63208 163 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 ARG2P78540 354 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 BIKQ13323 160 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 OXA1LQ15070 435 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 SPA17Q15506 151 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 DEFB110Q30KQ9 67 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 CDKL4Q5MAI5 379 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 CTSL3PQ5NE16 218 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 TTC23LQ6PF05 361 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 DOLPP1Q86YN1 238 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 MED12LQ86YW9 2145 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 RIMKLAQ8IXN7 391 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 SYCE1Q8N0S2 351 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 APCDD1LQ8NCL9 501 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 FAM57AQ8TBR7 257 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 CCDC110Q8TBZ0 833 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 LKAAEAR1Q8TD35 194 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 ELMO1Q92556 727 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 RBMXL1Q96E39 390 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 WFIKKN1Q96NZ8 548 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 EBNA1BP2Q99848 306 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 CHAC1Q9BUX1 264 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 DRC3Q9H069 523 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 XKR8Q9H6D3 395 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 MRPS30Q9NP92 439 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 CALYQ9NYX4 217 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 STMN3Q9NZ72 180 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 C3orf18Q9UK00 162 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 TMEM14AQ9Y6G1 99 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 ITPR3Q14573 2671 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 TACC2O95359 2948 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 SETD2Q9BYW2 2564 aaPredicted RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 ANKHD1Q8IWZ3 2542 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 YLPM1P49750 1951 aaKnown RBP1.74□□□□□ -2.13
COPS3-217ENST00000583160 ACANP16112 2415 aa1.74□□□□□ -2.13
COPS3-217ENST00000583160 AKAP6Q13023 2319 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 HEATR5AQ86XA9 2040 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 LRP5LA4QPB2 252 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 OR51F1A6NGY5 319 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 IQCF5A8MTL0 148 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 GOLGA6L19H0YKK7 550 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 KLRC4-KLRK1H3BQV0 150 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 C19orf84I3L1E1 186 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 CCL21O00585 134 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 CCL22O00626 93 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 PFDN6O15212 129 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 CTAG2O75638 210 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 TSPAN12O95859 305 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 CATP04040 527 aaKnown RBP1.73□□□□□ -2.13
COPS3-217ENST00000583160 C8GP07360 202 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 HEXBP07686 556 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 SERPINA6P08185 405 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 TPM1P09493 284 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 COX6B1P14854 86 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 IVDP26440 423 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 PSMB5P28074 263 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 IMPA1P29218 277 aa1.73□□□□□ -2.13
COPS3-217ENST00000583160 PBLDP30039 288 aaPredicted RBP1.73□□□□□ -2.13
COPS3-217ENST00000583160 RPL22P35268 128 aaKnown RBP1.73□□□□□ -2.13
COPS3-217ENST00000583160 OPRM1P35372 400 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms