RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 UBA52P62987 128 aaKnown RBP20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 ELF3P78545 371 aaPredicted RBP20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 IL13RA1P78552 427 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 MRPL28Q13084 256 aaKnown RBP20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 IKZF1Q13422 519 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF691Q5VV52 312 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 RDH10Q8IZV5 341 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 SETD9Q8NE22 299 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 ANGPTL6Q8NI99 470 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 RNF166Q96A37 237 aaPredicted RBP20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 PELI1Q96FA3 418 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 CHST5Q9GZS9 411 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 MS4A7Q9GZW8 240 aaPredicted RBP20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 ERVK13-1Q9NX77 482 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 FRRS1LQ9P0K9 344 aa20.57■□□□□ 0.88
CDC42EP4-205ENST00000580315 A0A1B0GW55 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 ISG15P05161 165 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L2P0CJ85 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L3P0CJ86 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L4P0CJ87 422 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L5P0CJ88 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L6P0CJ89 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L7P0CJ90 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 GABPB1Q06547 395 aaPredicted RBP20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 CNN3Q15417 329 aaKnown RBP20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 SMIM21Q3B7S5 101 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4L9Q6RFH8 374 aaPredicted RBP20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF788Q6ZQV5 615 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DHRSXQ8N5I4 330 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 POC1AQ8NBT0 407 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 OR52I1Q8NGK6 324 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 TRMT10AQ8TBZ6 339 aaKnown RBP20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 PP6455Q8WZ26 134 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 DUX4Q9UBX2 424 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF69Q9UC07 566 aa20.56■□□□□ 0.88
CDC42EP4-205ENST00000580315 TRAV40A0A0B4J280 105 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 FAM230AA0A1W2PPH8 454 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 WBP4O75554 376 aaKnown RBP20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 RPSAP08865 295 aaKnown RBP20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 GABRA2P47869 451 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 FUT6P51993 359 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 NANOS3P60323 173 aaKnown RBP20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 METTL11BQ5VVY1 283 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 NPRL2Q8WTW4 380 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 GAFA1Q96PS6 74 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 PCGF1Q9BSM1 259 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 RPUSD1Q9UJJ7 312 aaKnown RBP20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 HHLA2Q9UM44 414 aa20.55■□□□□ 0.88
CDC42EP4-205ENST00000580315 IRGMA1A4Y4 181 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 SIGLEC5O15389 551 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 SYNGR1O43759 233 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 NOS1APO75052 506 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 FCN3O75636 299 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 TOX4O94842 621 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 ACAA1P09110 424 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 PGA5P0DJD9 388 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 IGHV4-38-2P0DP08 117 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF20P17024 532 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 AMY2BP19961 511 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 IL18R1Q13478 541 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 ALKBH1Q13686 389 aaKnown RBP20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 UBE2V2Q15819 145 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 PRR31Q5SQ13 230 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF676Q8N7Q3 588 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 HAVCR2Q8TDQ0 301 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 BORCS8Q96FH0 119 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 WDFY2Q96P53 400 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF747Q9BV97 191 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 PKIBQ9C010 78 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 VCXQ9H320 206 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 CNTD2Q9H8S5 307 aa20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 SLC25A10Q9UBX3 287 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP4-205ENST00000580315 IGHV3OR16-10A0A075B7F0 116 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 CASQ2O14958 399 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 NXPH2O95156 264 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 CLIC3O95833 236 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 PSG2P11465 335 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 MPZP25189 248 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 GBX2P52951 348 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 SMN1Q16637 294 aaKnown RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 OGFRL1Q5TC84 451 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 GPR157Q5UAW9 335 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 ACP7Q6ZNF0 438 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 DMRTB1Q96MA1 342 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 ZNF488Q96MN9 340 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 DCLRE1BQ9H816 532 aa20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 ISG20L2Q9H9L3 353 aaKnown RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 FGF20Q9NP95 211 aaPredicted RBP20.53■□□□□ 0.88
CDC42EP4-205ENST00000580315 IGKV1D-17A0A075B6S4 117 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 OR4C45A6NMZ5 311 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 PLATP00750 562 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 DCKP27707 260 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 BPIFB3P59826 476 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 ADARB1P78563 741 aaKnown RBP20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 FOXL1Q12952 345 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 IL24Q13007 206 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 DGUOKQ16854 277 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 C9orf139Q6ZV77 190 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 ANGPTL5Q86XS5 388 aa20.52■□□□□ 0.88
CDC42EP4-205ENST00000580315 FGFRL1Q8N441 504 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms