RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 SDHCQ99643 169 aaPredicted RBP8.72□□□□□ -1.01
SS18-210ENST00000578700 CHST5Q9GZS9 411 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 SHARPINQ9H0F6 387 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CST11Q9H112 138 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CDH20Q9HBT6 801 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 NGBQ9NPG2 151 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 TBCCD1Q9NVR7 557 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 CISD1Q9NZ45 108 aaKnown RBP8.72□□□□□ -1.01
SS18-210ENST00000578700 GHRLQ9UBU3 117 aa8.72□□□□□ -1.01
SS18-210ENST00000578700 MRPS28Q9Y2Q9 187 aaKnown RBP8.72□□□□□ -1.01
SS18-210ENST00000578700 ZNF816-ZNF321PA0A0X1KG74 233 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 DPRXA6NFQ7 191 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 GGT3PA6NGU5 568 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 XRCC3O43542 346 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 GSTZ1O43708 216 aaPredicted RBP8.71□□□□□ -1.02
SS18-210ENST00000578700 LYZL6O75951 148 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 ECDO95905 644 aaPredicted RBP8.71□□□□□ -1.02
SS18-210ENST00000578700 CD8AP01732 235 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 HLA-DQB1P01920 261 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 CD37P11049 281 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 IGHV1-2P23083 117 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 GSK3AP49840 483 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 FOXG1P55316 489 aaPredicted RBP8.71□□□□□ -1.02
SS18-210ENST00000578700 BSPH1Q075Z2 132 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 GABRA6Q16445 453 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 TMEM249Q2WGJ8 235 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 ASPHD2Q6ICH7 369 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 FAM166AQ6J272 317 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 ZNF529Q6P280 563 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 Q6ZSR3 168 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 IL17RELQ6ZVW7 336 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 OR2W3Q7Z3T1 314 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 MDP1Q86V88 176 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 TOMM5Q8N4H5 51 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 DTX3Q8N9I9 347 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 CSNK2A3Q8NEV1 391 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 OR52N4Q8NGI2 321 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 OR2AE1Q8NHA4 323 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 KCNG3Q8TAE7 436 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 SLC25A28Q96A46 364 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 SLC25A38Q96DW6 304 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 POM121L2Q96KW2 1035 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 OR10A4Q9H209 315 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 CNTD2Q9H8S5 307 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 BARX1Q9HBU1 254 aaPredicted RBP8.71□□□□□ -1.02
SS18-210ENST00000578700 PCDHB16Q9NRJ7 776 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 AMDHD2Q9Y303 409 aa8.71□□□□□ -1.02
SS18-210ENST00000578700 LOC100509620A0A075B734 347 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 TMEM272A0A1B0GTI8 110 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 GABARAPH6UMI1 98 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 KDM4BO94953 1096 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 NRASP01111 189 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 COX5AP20674 150 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 CDK2P24941 298 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 ATP1B3P54709 279 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 MTCP1P56278 107 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 TAS2R20P59543 309 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 GPR176Q14439 515 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 KISS1Q15726 138 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 C1QTNF12Q5T7M4 302 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 CYB5R2Q6BCY4 276 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 COLCA1Q6ZS62 124 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 KRT74Q7RTS7 529 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 SPSB4Q96A44 273 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 BOD1Q96IK1 185 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 ABHD1Q96SE0 405 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
SS18-210ENST00000578700 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
SS18-210ENST00000578700 TRAF4Q9BUZ4 470 aaPredicted RBP8.7□□□□□ -1.02
SS18-210ENST00000578700 CACNG6Q9BXT2 260 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 CHODLQ9H9P2 273 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 FAIMQ9NVQ4 179 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 B3GNT2Q9NY97 397 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 MALRD1Q5VYJ5 2156 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 TENM1Q9UKZ4 2725 aa8.7□□□□□ -1.02
SS18-210ENST00000578700 TRAV18A0A075B6X5 111 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 hCG_38984A0A1B0GV85 526 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 FAM240BA0A1B0GVZ2 78 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 ANKRD30BLA7E2S9 258 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 LYRM1O43325 122 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 CHRM2P08172 466 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 CBR1P16152 277 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 SELEP16581 610 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 SRD5A1P18405 259 aa8.69□□□□□ -1.02
SS18-210ENST00000578700 TUBG1P23258 451 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms