RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 PPIAL4DF5H284 164 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 F5H5T6 163 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CLDN34H7C241 214 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC28A1O00337 649 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 GYG2O15488 501 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PPIHO43447 177 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 GGCTO75223 188 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 UGT2B17O75795 530 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 GLSO94925 669 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ETHE1O95571 254 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TSPAN12O95859 305 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 IGSF6O95976 241 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 GAPDHP04406 335 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 GYPCP04921 128 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC35G4P0C7Q5 338 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PPIAL4FP0DN26 164 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 IL7P13232 177 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 UCHL3P15374 230 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 MMP11P24347 488 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 HTR2AP28223 471 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SDC4P31431 198 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PRDX2P32119 198 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TTPAP49638 278 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RAB7AP51149 207 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4D2P58180 307 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RAB2AP61019 212 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 UBE2KP61086 200 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 STXBP1P61764 594 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RRAS2P62070 204 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 EMX1Q04741 257 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TPBGQ13641 420 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PARP15Q460N3 678 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FAM74A3Q4VXF1 159 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ACSM3Q53FZ2 586 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RBM48Q5RL73 367 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SAMD13Q5VXD3 122 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM42Q69YG0 159 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FAHD1Q6P587 224 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 DCUN1D2Q6PH85 259 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 KCNIP4Q6PIL6 250 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 B3GLCTQ6Y288 498 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF620Q6ZNG0 422 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 LINC00299Q6ZSB3 139 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM179Q6ZVK1 233 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 AHSA2Q719I0 299 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TMED4Q7Z7H5 227 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 MRPL52Q86TS9 123 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SERPINA9Q86WD7 417 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF683Q8IZ20 524 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM123Q8N131 208 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF557Q8N988 423 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR10G3Q8NGC4 313 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR5L2Q8NGL0 311 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR52E5Q8NH55 327 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR51F2Q8NH61 342 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 OR5AK3PQ8NH89 298 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NEIL3Q8TAT5 605 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 M1APQ8TC57 530 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FAM110BQ8TC76 370 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM239Q8WW34 195 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PIH1D2Q8WWB5 315 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RGP1Q92546 391 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 DCUN1D4Q92564 292 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NAT6Q93015 286 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FAM131CQ96AQ9 280 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 MS4A14Q96JA4 679 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NOL4LQ96MY1 436 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 PHB2Q99623 299 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CMSS1Q9BQ75 279 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 DCUN1D5Q9BTE7 237 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC17A9Q9BYT1 436 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 TBL1XR1Q9BZK7 514 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NXF2Q9GZY0 626 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 COMMD4Q9H0A8 199 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 RPF2Q9H7B2 306 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NIPAL2Q9H841 368 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ELOVL3Q9HB03 270 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 ISYNA1Q9NPH2 558 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC2A9Q9NRM0 540 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 NLE1Q9NVX2 485 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 MED9Q9NWA0 146 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 DDIT4Q9NX09 232 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 METTL1Q9UBP6 276 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 VPREB3Q9UKI3 123 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CDH10Q9Y6N8 788 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 FMN1Q68DA7 1419 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 COL1A2P08123 1366 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 CNTNAP1P78357 1384 aa2.48□□□□□ -2.01
SMCHD1-202ENST00000577300 KIF21AQ7Z4S6 1674 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ZMYM6O95789 1325 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ADGRA3Q8IWK6 1321 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 MBD5Q9P267 1494 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 CEP164Q9UPV0 1460 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 AKAP12Q02952 1782 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 A0A1B0GVI7 797 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 A0A1W2PPE3 182 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 IGSF23A1L1A6 192 aa2.47□□□□□ -2.01
SMCHD1-202ENST00000577300 ANKRD30BLA7E2S9 258 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms