RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 J3QT63 122 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 PLPP2O43688 288 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 LMX1BO60663 402 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 ALX3O95076 343 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 ZNF205O95201 554 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 MSMBP08118 114 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 ACAA1P09110 424 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 WNT2P09544 360 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 ZNF16P17020 682 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 CD80P33681 288 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 MAP2K4P45985 399 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 RBP2P50120 134 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 DOC2BQ14184 412 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 SPHARQ15513 63 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 ESCO2Q56NI9 601 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 FAM201AQ5SY85 155 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 SFRP4Q6FHJ7 346 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 XAF1Q6GPH4 301 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 HAGHLQ6PII5 290 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 LHFPL2Q6ZUX7 228 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 GLCCI1Q86VQ1 547 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 SPARTQ8N0X7 666 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 PARP16Q8N5Y8 322 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 DEFB108BQ8NET1 73 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 OR10AC1Q8NH08 325 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 AQP3Q92482 292 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 THRSPQ92748 146 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 GHSRQ92847 366 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 SPSB1Q96BD6 273 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 C12orf43Q96C57 262 aaKnown RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 NEIL1Q96FI4 390 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 PKIBQ9C010 78 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 METTL17Q9H7H0 456 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 ISYNA1Q9NPH2 558 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 DNAJB11Q9UBS4 358 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 LSM2Q9Y333 95 aaKnown RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 SIRT4Q9Y6E7 314 aaPredicted RBP9.23□□□□□ -0.93
CHD3-216ENST00000573936 A0A087WXM4 84 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 TRIM64CA6NLI5 447 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 MAGEB3O15480 346 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 AKR7A2O43488 359 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 NOS1APO75052 506 aaPredicted RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 CYB5AP00167 134 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 LALBAP00709 142 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 RPS2P15880 293 aaKnown RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 CELP19835 753 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 GLRA1P23415 457 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 MPZP25189 248 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 AZGP1P25311 298 aaKnown RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 RBMXP38159 391 aaKnown RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 NPY4RP50391 375 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 EMX1Q04741 257 aaPredicted RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 IL24Q13007 206 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 HNRNPA0Q13151 305 aaKnown RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 GPR50Q13585 617 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 MED22Q15528 200 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 TBCEQ15813 527 aaPredicted RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 DMRTC1Q5HYR2 192 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 MKXQ8IYA7 352 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 PIP4P2Q8N4L2 257 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 POC1AQ8NBT0 407 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 TRMT10AQ8TBZ6 339 aaKnown RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 TMIGD2Q96BF3 282 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 CPNE2Q96FN4 548 aaPredicted RBP9.22□□□□□ -0.93
CHD3-216ENST00000573936 DNTTIP1Q9H147 329 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 ACOT13Q9NPJ3 140 aa9.22□□□□□ -0.93
CHD3-216ENST00000573936 PPIAL4CA0A0B4J2A2 164 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 IGKV1-9A0A0C4DH69 117 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 TRBV5-5A0A0J9YX44 114 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 A8MXK9 166 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 TNFRSF13BO14836 293 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 ADAM20O43506 726 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 SULT1B1O43704 296 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 RHBDL1O75783 438 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 GYPAP02724 150 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 EGR1P18146 543 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 RAB3AP20336 220 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 HNF1AP20823 631 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 GATA3P23771 443 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 MAPK3P27361 379 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 SOX2P48431 317 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 MTCP1P56278 107 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 GNB2P62879 340 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 Q499Y3 187 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 ATPAF1Q5TC12 328 aaPredicted RBP9.21□□□□□ -0.94
CHD3-216ENST00000573936 SLC36A1Q7Z2H8 476 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 ANGPTL5Q86XS5 388 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 FAM90A1Q86YD7 464 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 Q8IYB0 196 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 SVOPQ8N4V2 548 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 MS4A15Q8N5U1 240 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 ZFP41Q8N8Y5 198 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 C19orf18Q8NEA5 215 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 OR13C9Q8NGT0 318 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 NPRL2Q8WTW4 380 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 UFD1Q92890 307 aa9.21□□□□□ -0.94
CHD3-216ENST00000573936 TMEM106AQ96A25 262 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms