RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 RSPO1Q2MKA7 263 aaPredicted RBP13.68□□□□□ -0.22
NUP88-207ENST00000573584 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 C14orf79Q96F83 325 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 ANXA10Q9UJ72 324 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 APOC1P02654 83 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 NR2C1P13056 603 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 RAB5BP61020 215 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 PHYHD1Q5SRE7 291 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 CLEC9AQ6UXN8 241 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 UBAC2Q8NBM4 344 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 SPACA9Q96E40 222 aaPredicted RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 RASL10BQ96S79 203 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 TSPAN15O95858 294 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 DBHP09172 617 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 ENDOGQ14249 297 aaKnown RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 C15orf54Q8N8G6 183 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 LYPD6BQ8NI32 183 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 FAAP24Q9BTP7 215 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 CRB3Q9BUF7 120 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 RBM24Q9BX46 236 aaKnown RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 DEFB126Q9BYW3 111 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 PLEKHA2Q9HB19 425 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 FAM212BQ9NTI7 297 aaPredicted RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 CA14Q9ULX7 337 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 TIMM10BQ9Y5J6 103 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 KPTNQ9Y664 436 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 RRADP55042 308 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 MTCP1P56278 107 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 PIGPP57054 158 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 CHAF1BQ13112 559 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 HABP2Q14520 560 aaPredicted RBP13.67□□□□□ -0.22
NUP88-207ENST00000573584 SP6Q3SY56 376 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 Q96M66 194 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 LIME1Q9H400 295 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 RNF122Q9H9V4 155 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 DECR2Q9NUI1 292 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 KCNIP3Q9Y2W7 256 aa13.67□□□□□ -0.22
NUP88-207ENST00000573584 NCOA6Q14686 2063 aaPredicted RBP13.66□□□□□ -0.22
NUP88-207ENST00000573584 M0R135 149 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 FOLR2P14207 255 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
NUP88-207ENST00000573584 SNRPEP62304 92 aaKnown RBP13.66□□□□□ -0.22
NUP88-207ENST00000573584 TOMM40LQ969M1 308 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 ZNF799Q96GE5 643 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 EDARQ9UNE0 448 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 ZNF850A8MQ14 1090 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 ANGPTL7O43827 346 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 ZNF205O95201 554 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 OPRM1P35372 400 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 TAF9Q16594 264 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 FADS6Q8N9I5 356 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 ZNF385AQ96PM9 386 aaKnown RBP13.66□□□□□ -0.22
NUP88-207ENST00000573584 GPR173Q9NS66 373 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 PLEK2Q9NYT0 353 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 STARD10Q9Y365 291 aa13.66□□□□□ -0.22
NUP88-207ENST00000573584 MSTNO14793 375 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 EIF3GO75821 320 aaKnown RBP eCLIP13.65□□□□□ -0.22
NUP88-207ENST00000573584 MBPP02686 304 aaPredicted RBP13.65□□□□□ -0.22
NUP88-207ENST00000573584 SRFP11831 508 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 PTAFRP25105 342 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 HMGN3Q15651 99 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 MIDNQ504T8 468 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 BSCL2Q96G97 398 aaPredicted RBP13.65□□□□□ -0.22
NUP88-207ENST00000573584 ASCC3Q8N3C0 2202 aaKnown RBP13.65□□□□□ -0.22
NUP88-207ENST00000573584 IGHV3-15A0A0B4J1V0 119 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 E5RGE8 158 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 PAX6P26367 422 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 H3F3AP84243 136 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 ZNF616Q08AN1 781 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 ABCA11PQ4W5N1 156 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 SPSB2Q99619 263 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
NUP88-207ENST00000573584 C1orf196B1AJZ1 125 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 PRSS44E7EML9 344 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 NME2P1O60361 137 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 S100A12P80511 92 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 RSU1Q15404 277 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 SNAI3Q3KNW1 292 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 PLXDC2Q6UX71 529 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 TMEM54Q969K7 222 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 SGK3Q96BR1 496 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 C10orf35Q96D05 121 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 METTL9Q9H1A3 318 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 NECAP2Q9NVZ3 263 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 AK3Q9UIJ7 227 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 CHCHD2Q9Y6H1 151 aaPredicted RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 TOX3O15405 576 aaPredicted RBP13.64□□□□□ -0.23
NUP88-207ENST00000573584 DHHO43323 396 aa13.64□□□□□ -0.23
NUP88-207ENST00000573584 SPRY1O43609 319 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms