RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CCNB2O95067 398 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 DHFRP00374 187 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 LALBAP00709 142 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ATP1B1P05026 303 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MSMBP08118 114 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 TACSTD2P09758 323 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 HSMCR30P0CW71 290 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 HPGDP15428 266 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 GGT1P19440 569 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 PRTN3P24158 256 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MYL9P24844 172 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 SSTR1P30872 391 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 SPRP35270 261 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MAGEA6P43360 314 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RGS4P49798 205 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 XKP51811 444 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 NKX2-5P52952 324 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 CARD18P57730 90 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 BTG1P62324 171 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 KCNJ10P78508 379 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MS4A2Q01362 244 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZP4Q12836 540 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 GK3PQ14409 553 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 AANATQ16613 207 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ADPRMQ3LIE5 342 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 AVPI1Q5T686 147 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 HACD4Q5VWC8 232 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 HBMQ6B0K9 141 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 FAM53AQ6NSI3 398 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 METAP1DQ6UB28 335 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 C17orf107Q6ZR85 190 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 UTS2BQ765I0 119 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 GDPD3Q7L5L3 318 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 COMMD7Q86VX2 200 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 NR2C2APQ86WQ0 139 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RDH10Q8IZV5 341 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 STPG2Q8N412 459 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF433Q8N7K0 673 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 LRTM2Q8N967 370 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 GATSQ8NAP1 163 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 SLC37A3Q8NCC5 494 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF540Q8NDQ6 660 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 OR52R1Q8NGF1 315 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 FBXO30Q8TB52 745 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 FAM110BQ8TC76 370 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 SLC25A36Q96CQ1 311 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RCN3Q96D15 328 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 YIPF6Q96EC8 236 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RNF170Q96K19 258 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 NSMCE2Q96MF7 247 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF300Q96RE9 604 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 EBF4Q9BQW3 602 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 POTEKPQ9BYX7 375 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF436Q9C0F3 470 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ROGDIQ9GZN7 287 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 SLIRPQ9GZT3 109 aaKnown RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 CCDC90BQ9GZT6 254 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 IL22Q9GZX6 179 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 DCSTAMPQ9H295 470 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RNF121Q9H920 327 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 RAB9BQ9NP90 201 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 PRODH2Q9UF12 536 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 CD300AQ9UGN4 299 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MCTS1Q9ULC4 181 aaKnown RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 COPS3Q9UNS2 423 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MGAT4BQ9UQ53 548 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MRPS7Q9Y2R9 242 aaKnown RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MRPS18CQ9Y3D5 142 aaKnown RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 U3KQ87 197 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 NUP214P35658 2090 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 C13orf42A0A1B0GVH6 325 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 A0A1B0GWJ7 208 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 FAM159BA6NKW6 160 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 IFITM10A6NMD0 228 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SULT1C2O00338 296 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 DLGAP1O14490 977 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 TAPBPO15533 448 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 AIREO43918 545 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 CLN5O75503 358 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 KHDRBS3O75525 346 aaKnown RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 STX11O75558 287 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ANGPTL1O95841 491 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 PNPP00491 289 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 FABP1P07148 127 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ADRA2AP08913 450 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 OR4A8P0C604 315 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SLC35E2BP0CK96 405 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 CD1DP15813 335 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF17P17021 662 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 OGNP20774 298 aaKnown RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 GIFP27352 417 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 ELK3P41970 407 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SNRPD2P62316 118 aaKnown RBP4.38□□□□□ -1.71
SF3B3-214ENST00000572365 IFITM3Q01628 133 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 IL1RL1Q01638 556 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 TGM3Q08188 693 aa4.38□□□□□ -1.71
SF3B3-214ENST00000572365 SLC9A3R2Q15599 337 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms