RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TMEM33P57088 247 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 GNG3P63215 75 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 ZNF154Q13106 437 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 UBE2V2Q15819 145 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 Q6ZSR3 168 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 ANGPTL5Q86XS5 388 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 BATF2Q8N1L9 274 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 SVOPQ8N4V2 548 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 DEFB108BQ8NET1 73 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 OR5A2Q8NGI9 324 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 LRRC29Q8WV35 223 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 WIPI2Q9Y4P8 454 aa11.15□□□□□ -0.62
CCDC40-205ENST00000571028 DHRS7CA6NNS2 312 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM178BH3BS89 294 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 WNT9BO14905 357 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 HKR1P10072 659 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 ATF1P18846 271 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 HAAOP46952 286 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 UBA52P62987 128 aaKnown RBP11.14□□□□□ -0.63
CCDC40-205ENST00000571028 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-205ENST00000571028 CNN3Q15417 329 aaKnown RBP11.14□□□□□ -0.63
CCDC40-205ENST00000571028 LIPKQ5VXJ0 399 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM42Q69YG0 159 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 SFRP4Q6FHJ7 346 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-205ENST00000571028 HAGHLQ6PII5 290 aaPredicted RBP11.14□□□□□ -0.63
CCDC40-205ENST00000571028 SPARTQ8N0X7 666 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 SCCPDHQ8NBX0 429 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 PP6455Q8WZ26 134 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 UFD1Q92890 307 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 BORCS8Q96FH0 119 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 MGLLQ99685 303 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 CHST5Q9GZS9 411 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 ZCCHC4Q9H5U6 513 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 ACOT13Q9NPJ3 140 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 TAS2R4Q9NYW5 299 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 RNF7Q9UBF6 113 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 NPTNQ9Y639 398 aa11.14□□□□□ -0.63
CCDC40-205ENST00000571028 IGHV3OR15-7A0A075B7D8 119 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 A0A0G2JMP0 313 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 A0A0X1KG70 313 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 PQLC2LA1A4F0 135 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM210A6NLX4 147 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 PLPP2O43688 288 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 CD2P06729 351 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 HCKP08631 526 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 FPR2P25090 351 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 PSMB9P28065 219 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 GATA4P43694 442 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 BDH1Q02338 343 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 INSL4Q14641 139 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 TBCEQ15813 527 aaPredicted RBP11.13□□□□□ -0.63
CCDC40-205ENST00000571028 YIF1BQ5BJH7 314 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF773Q6PK81 442 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 ZNF367Q7RTV3 350 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 C11orf53Q8IXP5 236 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 C1orf87Q8N0U7 546 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 OR4M2Q8NGB6 313 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 NANPQ8TBE9 248 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 RPS4Y2Q8TD47 263 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 ERGIC1Q969X5 290 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 TMEM106AQ96A25 262 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 RFT1Q96AA3 541 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 C10orf35Q96D05 121 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 OPALINQ96PE5 141 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 OR14A2Q96R54 314 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 UNKLQ9H9P5 680 aaKnown RBP11.13□□□□□ -0.63
CCDC40-205ENST00000571028 PPIAL4AQ9Y536 164 aa11.13□□□□□ -0.63
CCDC40-205ENST00000571028 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 IGKV1-9A0A0C4DH69 117 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 OR5B21A6NL26 309 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 PPIAL4DF5H284 164 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 AKR7A2O43488 359 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 MRPS14O60783 128 aaKnown RBP11.12□□□□□ -0.63
CCDC40-205ENST00000571028 RHBDL1O75783 438 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 PPIAL4FP0DN26 164 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 PRKACBP22694 351 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 AZGP1P25311 298 aaKnown RBP11.12□□□□□ -0.63
CCDC40-205ENST00000571028 POU3F4P49335 361 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 FUT6P51993 359 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ATP1B3P54709 279 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 RPS11P62280 158 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC40-205ENST00000571028 BTG1P62324 171 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 RPS25P62851 125 aaKnown RBP11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ACSM1Q08AH1 577 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 ZMYND11Q15326 602 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 NEDD8Q15843 81 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 Q499Y3 187 aa11.12□□□□□ -0.63
CCDC40-205ENST00000571028 KCTD21Q4G0X4 260 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms