RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	MEPCE	Q7L2J0	689 aa	Known RBP	13.43	□□□□□ -0.26
PKM-223	ENST00000569050	CSNK2A3	Q8NEV1	391 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	OR11H6	Q8NGC7	330 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	OR13D1	Q8NGV5	346 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	ASB9	Q96DX5	294 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	PYURF	Q96I23	114 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	P2RX4	Q99571	388 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	ZNF319	Q9P2F9	582 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.43	□□□□□ -0.26
PKM-223	ENST00000569050	MPC1	Q9Y5U8	109 aa		13.43	□□□□□ -0.26
PKM-223	ENST00000569050	C17orf98	A8MV24	154 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	ATP5H	O75947	161 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	RASSF2	P50749	326 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	OR12D2	P58182	307 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	RPL23A	P62750	156 aa	Known RBP	13.42	□□□□□ -0.26
PKM-223	ENST00000569050	FLOT2	Q14254	428 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	TRIM25	Q14258	630 aa	Known RBP	13.42	□□□□□ -0.26
PKM-223	ENST00000569050	FGD3	Q5JSP0	725 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.42	□□□□□ -0.26
PKM-223	ENST00000569050	PRSS45	Q7RTY3	260 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	OR2W3	Q7Z3T1	314 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	CYP4Z1	Q86W10	505 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	OSR2	Q8N2R0	312 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	CD177	Q8N6Q3	437 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	OR2T27	Q8NH04	317 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	RNF170	Q96K19	258 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	OR52D1	Q9H346	318 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	ENPP4	Q9Y6X5	453 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	COMMD3-BMI1	R4GMX3	469 aa		13.42	□□□□□ -0.26
PKM-223	ENST00000569050	TRBV4-1	A0A0J9YWV2	114 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050		A0A1W2PRQ8	180 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	TCRBV5S2	A0A599	114 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	ZNF878	C9JN71	531 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	GSC2	O15499	205 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	MTRF1	O75570	445 aa	Known RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	SEMG1	P04279	462 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	FABP3	P05413	133 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	H1F0	P07305	194 aa	Known RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	SPARC	P09486	303 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	PIP	P12273	146 aa	Predicted RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	ACKR3	P25106	362 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	SLC6A6	P31641	620 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	MYCNOS	P40205	109 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	DYNC1I2	Q13409	638 aa	Known RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	DGCR6	Q14129	220 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	KCTD18	Q6PI47	426 aa	Predicted RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	FAM57B	Q71RH2	274 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	C16orf82	Q7Z2V1	217 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	OR51L1	Q8NGJ5	315 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	IFT27	Q9BW83	186 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	LIN7B	Q9HAP6	207 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	NDUFAF4	Q9P032	175 aa		13.41	□□□□□ -0.26
PKM-223	ENST00000569050	FAM32A	Q9Y421	112 aa	Known RBP	13.41	□□□□□ -0.26
PKM-223	ENST00000569050	RFPL4A	A6NLU0	287 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	RFPL4AL1	F8VTS6	287 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	AMY1A	P04745	511 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	AMY2A	P04746	511 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	CFL1	P23528	166 aa	Known RBP	13.4	□□□□□ -0.26
PKM-223	ENST00000569050	CD24	P25063	80 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	GPM6A	P51674	278 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PKM-223	ENST00000569050	ZNF329	Q86UD4	541 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	SPATA24	Q86W54	205 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	SBSPON	Q8IVN8	264 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	FTMT	Q8N4E7	242 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	LINC00471	Q8N535	108 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	PROKR2	Q8NFJ6	384 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	C7orf34	Q96L11	122 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	DUX3	Q96PT4	197 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	POMP	Q9Y244	141 aa		13.4	□□□□□ -0.26
PKM-223	ENST00000569050	ALMS1	Q8TCU4	4167 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	MEX3A	A1L020	520 aa	Known RBP	13.39	□□□□□ -0.27
PKM-223	ENST00000569050	CST4	P01036	141 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	PGA5	P0DJD9	388 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	ECI1	P42126	302 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	ZNF121	P58317	390 aa	Predicted RBP	13.39	□□□□□ -0.27
PKM-223	ENST00000569050	GRB2	P62993	217 aa	Known RBP	13.39	□□□□□ -0.27
PKM-223	ENST00000569050	SLC35F1	Q5T1Q4	408 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	MINOS1	Q5TGZ0	78 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	KRT77	Q7Z794	578 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	CALHM1	Q8IU99	346 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	ZNF561	Q8N587	486 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	OR52J3	Q8NH60	311 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	PIGC	Q92535	297 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	AKR1E2	Q96JD6	320 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	OR51I2	Q9H344	312 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	ABCB9	Q9NP78	766 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	TBC1D23	Q9NUY8	699 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	VNN3	Q9NY84	501 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	DNAJC27	Q9NZQ0	273 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	MINOS1-NBL1	R4GNA1	71 aa		13.39	□□□□□ -0.27
PKM-223	ENST00000569050	DHRS12	A0PJE2	317 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	PSMB11	A5LHX3	300 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	NUDT19	A8MXV4	375 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	SLC1A7	O00341	560 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	IGHV1-8	P0DP01	117 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	RHCE	P18577	417 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	EIF2B1	Q14232	305 aa	Known RBP	13.38	□□□□□ -0.27
PKM-223	ENST00000569050	SNCB	Q16143	134 aa		13.38	□□□□□ -0.27
PKM-223	ENST00000569050	FAM98B	Q52LJ0	330 aa	Known RBP	13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms