RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SLC16A14Q7RTX9 510 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ZER1Q7Z7L7 766 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 COMTD1Q86VU5 262 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 Q8N402 240 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 OR9Q2Q8NGE9 314 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 OR5H6Q8NGV6 325 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 NFKBIDQ8NI38 313 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ABHD4Q8TB40 342 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 SNAPC3Q92966 411 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 RFKQ969G6 155 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 OTULINQ96BN8 352 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 POM121L2Q96KW2 1035 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 CITED4Q96RK1 184 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ZNF607Q96SK3 696 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 DDOQ99489 341 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ANKRD19PQ9H560 264 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 AMBNQ9NP70 447 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 RLIMQ9NVW2 624 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 ELF5Q9UKW6 265 aaPredicted RBP9.13□□□□□ -0.95
CDH3-208ENST00000569036 ALG5Q9Y673 324 aa9.13□□□□□ -0.95
CDH3-208ENST00000569036 LOC100509620A0A075B734 347 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 A0A1W2PRD5 423 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 A0A1W2PRF3 423 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 A0A1W2PRM7 423 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 C5orf49A4QMS7 147 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 ZNF726A6NNF4 738 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 C5orf58C9J3I9 102 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 NPFFO15130 113 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 CHST1O43916 411 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 AGR2O95994 175 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 IFNA7P01567 189 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 AHCYP23526 432 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 STOMP27105 288 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 CHATP28329 748 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 CHI3L1P36222 383 aaPredicted RBP9.12□□□□□ -0.95
CDH3-208ENST00000569036 CD83Q01151 205 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 HSF2Q03933 536 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 PABPC1L2AQ5JQF8 200 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 CLLU1Q5K131 121 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 TNFAIP8L2Q6P589 184 aaPredicted RBP9.12□□□□□ -0.95
CDH3-208ENST00000569036 UNQ6126/PRO20091Q6UXV3 157 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 ZNF440Q8IYI8 595 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 Q8N2B8 174 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 LSMEM1Q8N8F7 131 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 DTX3Q8N9I9 347 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 ADPRHL1Q8NDY3 354 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 OR52N1Q8NH53 320 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 TAAR8Q969N4 342 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 FYTTD1Q96QD9 318 aaKnown RBP9.12□□□□□ -0.95
CDH3-208ENST00000569036 FUZQ9BT04 418 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 POLR2J3Q9H1A7 115 aaKnown RBP9.12□□□□□ -0.95
CDH3-208ENST00000569036 KCNN2Q9H2S1 579 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 MAN2C1Q9NTJ4 1040 aa9.12□□□□□ -0.95
CDH3-208ENST00000569036 A0A0B4J293 547 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 C12orf71A8MTZ7 269 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 INMT-MINDY4F8WBC2 141 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 GASTP01350 101 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 NUDT7P0C024 238 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 ETFAP13804 333 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 RPS4Y1P22090 263 aaKnown RBP9.11□□□□□ -0.95
CDH3-208ENST00000569036 SAA4P35542 130 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 GATA4P43694 442 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 MTNR1BP49286 362 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 PRB3Q04118 309 aaPredicted RBP9.11□□□□□ -0.95
CDH3-208ENST00000569036 CDONQ4KMG0 1287 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 ENTPD8Q5MY95 495 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 C9orf62Q8N4C0 152 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 OR52I1Q8NGK6 324 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 C8orf46Q8TAG6 207 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 SLC7A13Q8TCU3 470 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 TMEM54Q969K7 222 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
CDH3-208ENST00000569036 SSX3Q99909 188 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 DCTN5Q9BTE1 182 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 SLC38A1Q9H2H9 487 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 PLSCR3Q9NRY6 295 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 MED9Q9NWA0 146 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 GLTPQ9NZD2 209 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 SF3B6Q9Y3B4 125 aaKnown RBP9.11□□□□□ -0.95
CDH3-208ENST00000569036 NUBP2Q9Y5Y2 271 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 CDH10Q9Y6N8 788 aa9.11□□□□□ -0.95
CDH3-208ENST00000569036 CDHR4A6H8M9 788 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 LEUTXA8MZ59 168 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 OR10H3O60404 316 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 SLC22A5O76082 557 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 PSKH1P11801 424 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 ANXA3P12429 323 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 PRG2P13727 222 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 AZGP1P25311 298 aaKnown RBP9.1□□□□□ -0.95
CDH3-208ENST00000569036 SLC6A1P30531 599 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 TALDO1P37837 337 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 CRISP3P54108 245 aa9.1□□□□□ -0.95
CDH3-208ENST00000569036 EFNB1P98172 346 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms