RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 RPL22L1Q6P5R6 122 aaKnown RBP8.15□□□□□ -1.1
CLK3-220ENST00000567992 CRIP3Q6Q6R5 217 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 UTS2BQ765I0 119 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 FGFRL1Q8N441 504 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 ZNF676Q8N7Q3 588 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 BPIFB6Q8NFQ5 453 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 OR8B3Q8NGG8 313 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 ANGPTL6Q8NI99 470 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 TRMT10AQ8TBZ6 339 aaKnown RBP8.15□□□□□ -1.1
CLK3-220ENST00000567992 HAVCR2Q8TDQ0 301 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 NPRL2Q8WTW4 380 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 PP6455Q8WZ26 134 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 FGGYQ96C11 551 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 C12orf43Q96C57 262 aaKnown RBP8.15□□□□□ -1.1
CLK3-220ENST00000567992 ZNF488Q96MN9 340 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 OR8B2Q96RD0 313 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 BEX2Q9BXY8 128 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 TRIM36Q9NQ86 728 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 KAAG1Q9UBP8 84 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 ZNF222Q9UK12 451 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 PCDHGB5Q9Y5G0 923 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 INSIG2Q9Y5U4 225 aa8.15□□□□□ -1.1
CLK3-220ENST00000567992 LOC105371242A0A075B767 164 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 IGHV2-70DA0A0C4DH43 119 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 TRBV2A0A0J9YWF9 115 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 J3QLI3 93 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 OGG1O15527 345 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 ADAM20O43506 726 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 NDUFA2O43678 99 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 NOS1APO75052 506 aaPredicted RBP8.14□□□□□ -1.11
CLK3-220ENST00000567992 SELLP14151 372 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 GATA3P23771 443 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 GMFBP60983 142 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 GNB2P62879 340 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 SLC35A2P78381 396 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 MICBQ29980 383 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 ATPAF1Q5TC12 328 aaPredicted RBP8.14□□□□□ -1.11
CLK3-220ENST00000567992 DCAF12L2Q5VW00 463 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 RNLSQ5VYX0 342 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 DMKNQ6E0U4 476 aaPredicted RBP8.14□□□□□ -1.11
CLK3-220ENST00000567992 FAHD2BQ6P2I3 314 aaPredicted RBP8.14□□□□□ -1.11
CLK3-220ENST00000567992 TMPRSS11AQ6ZMR5 421 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 NLRC3Q7RTR2 1065 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 RNF144BQ7Z419 303 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 ANGPTL5Q86XS5 388 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 ZNF573Q86YE8 665 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 FAM216BQ8N7L0 139 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 POC1AQ8NBT0 407 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 OR13C3Q8NGS6 347 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 OR5AK2Q8NH90 309 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 GATAD2BQ8WXI9 593 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 SMIM19Q96E16 107 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 FAHD2AQ96GK7 314 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 PGLYRP3Q96LB9 341 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 TECTBQ96PL2 329 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 GAFA1Q96PS6 74 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 CCL13Q99616 98 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 NRIP2Q9BQI9 281 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 PKIBQ9C010 78 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 HES4Q9HCC6 221 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 SNTG1Q9NSN8 517 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 BABAM2Q9NXR7 383 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 NLKQ9UBE8 527 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 CLN8Q9UBY8 286 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 OR5V1Q9UGF6 321 aa8.14□□□□□ -1.11
CLK3-220ENST00000567992 ANK2Q01484 3957 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 IGKV1D-17A0A075B6S4 117 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 FAM230AA0A1W2PPH8 454 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 MAGEA13PA6NCF6 341 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 F8VVB4 439 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 F8VWA3 439 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 MT-ND2P03891 347 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 CDK1P06493 297 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ACAA1P09110 424 aaPredicted RBP8.13□□□□□ -1.11
CLK3-220ENST00000567992 PSG2P11465 335 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ZNF20P17024 532 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 SRD5A1P18405 259 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ADRA2CP18825 462 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ATF1P18846 271 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 HNF1AP20823 631 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 GLRA1P23415 457 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 AZGP1P25311 298 aaKnown RBP8.13□□□□□ -1.11
CLK3-220ENST00000567992 HSPA13P48723 471 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 NPY4RP50391 375 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 FUT6P51993 359 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ERVK11-1P61568 191 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 RPS11P62280 158 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLK3-220ENST00000567992 PAX8Q06710 450 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 IL24Q13007 206 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 IRF3Q14653 427 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 CNN3Q15417 329 aaKnown RBP8.13□□□□□ -1.11
CLK3-220ENST00000567992 DGUOKQ16854 277 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ZNF529Q6P280 563 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ACP7Q6ZNF0 438 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 ZNF788Q6ZQV5 615 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 C1QL2Q7Z5L3 287 aa8.13□□□□□ -1.11
CLK3-220ENST00000567992 BATF2Q8N1L9 274 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms