RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MRPL19P49406 292 aaKnown RBP0.33□□□□□ -2.36
CDH1-211ENST00000567320 AP1S2P56377 157 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 TRDNQ13061 729 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 DOC2AQ14183 400 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 TFDP2Q14188 446 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 ITIH4Q14624 930 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 ELOCQ15369 112 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 TMEM241Q24JQ0 296 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 PPP1R42Q7Z4L9 355 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 PRNTQ86SH4 94 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 SLC22A9Q8IVM8 553 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 OR2K2Q8NGT1 345 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 OR51F2Q8NH61 342 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 MFSD8Q8NHS3 518 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 ORAOV1Q8WV07 137 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 MRPL48Q96GC5 212 aaKnown RBP0.33□□□□□ -2.36
CDH1-211ENST00000567320 SCGB3A2Q96PL1 93 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 TMEM175Q9BSA9 504 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 THTPAQ9BU02 230 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 PRORYQ9H606 182 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 HSPE1-MOB4S4R3N1 261 aa0.33□□□□□ -2.36
CDH1-211ENST00000567320 BRCA1P38398 1863 aaKnown RBP0.33□□□□□ -2.36
CDH1-211ENST00000567320 ZNF608Q9ULD9 1512 aaPredicted RBP0.33□□□□□ -2.36
CDH1-211ENST00000567320 IGHV3-21A0A0B4J1V1 117 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 TRAV8-6A0A0B4J262 113 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 OR2AG2A6NM03 316 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 C9JQL5 133 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 F5H5T6 163 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 TDP2O95551 362 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 NAPSAO96009 420 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 FTH1P02794 183 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 GPX1P07203 203 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 G6PCP35575 357 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 NBL1P41271 181 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 ACTR3P61158 418 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 BCL2A1Q16548 175 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 ALKBH6Q3KRA9 238 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 ACSBG2Q5FVE4 666 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 WDR82Q6UXN9 313 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 OTUD6AQ7L8S5 288 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 NANOGNBQ7Z5D8 188 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 UNC93AQ86WB7 457 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 OR56A4Q8NGH8 313 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 OR13C2Q8NGS9 318 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 C2orf15Q8WU43 125 aaKnown RBP0.32□□□□□ -2.36
CDH1-211ENST00000567320 SLC38A4Q969I6 547 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 APH1AQ96BI3 265 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 GPR21Q99679 349 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 MTG1Q9BT17 334 aaPredicted RBP0.32□□□□□ -2.36
CDH1-211ENST00000567320 C20orf24Q9BUV8 137 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 OR5V1Q9UGF6 321 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 ADAMTS7Q9UKP4 1686 aa0.32□□□□□ -2.36
CDH1-211ENST00000567320 CCDC88CQ9P219 2028 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 RGS12O14924 1447 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 TRBV11-1A0A0K0K1C0 115 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 C17orf98A8MV24 154 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 LINC01619G3V211 115 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 ERI3O43414 337 aaKnown RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 MLNP12872 115 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 CTLA4P16410 223 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 BLVRBP30043 206 aaPredicted RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 UQCRFS1P47985 274 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 SLC18A1P54219 525 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 OR2B8PP59922 312 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 ANKDD1AQ495B1 522 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 RWDD4Q6NW29 188 aaKnown RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 LYZL2Q7Z4W2 148 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 SELENOHQ8IZQ5 122 aaKnown RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 AKR7LQ8NHP1 331 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 DCANP1Q8TF63 244 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 BAALCQ8WXS3 180 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 TNFRSF14Q92956 283 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 CRACR2AQ9BSW2 395 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 NUP58Q9BVL2 599 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 MRPL20Q9BYC9 149 aaKnown RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 AICDAQ9GZX7 198 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 STMN4Q9H169 189 aaPredicted RBP0.31□□□□□ -2.36
CDH1-211ENST00000567320 CXCL16Q9H2A7 254 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 RHOFQ9HBH0 211 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 ZNF160Q9HCG1 818 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 TREX1Q9NSU2 369 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 ZNF780BQ9Y6R6 833 aa0.31□□□□□ -2.36
CDH1-211ENST00000567320 SETD1AO15047 1707 aaKnown RBP0.3□□□□□ -2.36
CDH1-211ENST00000567320 GOLGA8JA6NMD2 632 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 FNDC10F2Z333 226 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 F5H5P2 479 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 ZNF189O75820 626 aaPredicted RBP0.3□□□□□ -2.36
CDH1-211ENST00000567320 DHRS3O75911 302 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 OR2A4O95047 310 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 OR4Q2P0C623 313 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 GOLGA8HP0CJ92 632 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 RAB11AP62491 216 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 RPL10AP62906 217 aaKnown RBP0.3□□□□□ -2.36
CDH1-211ENST00000567320 PMVKQ15126 192 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 GABRA6Q16445 453 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 MAJINQ3KP22 176 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 HSDL1Q3SXM5 330 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 PYCR3Q53H96 274 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 CLEC18BQ6UXF7 455 aa0.3□□□□□ -2.36
CDH1-211ENST00000567320 CYB561A3Q8NBI2 242 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms