RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 IGLV8-61A0A075B6I0 122 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 IGHV3-35A0A0C4DH35 117 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 A0A1W2PRG6 482 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ZNF233A6NK53 670 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 EFCAB9A8MZ26 197 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 CCRL2O00421 344 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 AZIN1O14977 448 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 UBDO15205 165 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 CYTH3O43739 400 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 GALR3O60755 368 aaPredicted RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 UPK1BO75841 260 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 SLC25A27O95847 323 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 IGHV3-48P01763 117 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 PCCAP05165 728 aaPredicted RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 HPNP05981 417 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 IGKV5-2P06315 115 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ICAM2P13598 275 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 CD1EP15812 388 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RAB3BP20337 219 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 PAX6P26367 422 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 GTF2H1P32780 548 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 IFNGR2P38484 337 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ACOT2P49753 483 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 P2RX1P51575 399 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RAP1GDS1P52306 607 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 AP2S1P53680 142 aaPredicted RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 TCL1AP56279 114 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 LAMTOR4Q0VGL1 99 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 TMED2Q15363 201 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RBMY1FQ15415 496 aaKnown RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 NSDHLQ15738 373 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 SGCAQ16586 387 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 DNAJC24Q6P3W2 148 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 PLET1Q6UQ28 207 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 METTL7BQ6UX53 244 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 TEX43Q6ZNM6 134 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RFLNAQ6ZTI6 216 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 NPWQ8N729 165 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 NKAPP1Q8N9T2 125 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 OR6N1Q8NGY5 312 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 OR2G3Q8NGZ4 309 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 PIGXQ8TBF5 258 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ZFAND1Q8TCF1 268 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 BLNKQ8WV28 456 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 DCUN1D4Q92564 292 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RAB8BQ92930 207 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 MARC2Q969Z3 335 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 SMIM19Q96E16 107 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 VSIG2Q96IQ7 327 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 BTN2A3PQ96KV6 586 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 PSMB7Q99436 277 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 LITAFQ99732 161 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 TRIM15Q9C019 465 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 TOLLIPQ9H0E2 274 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 METTL9Q9H1A3 318 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 CENPHQ9H3R5 247 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 FBXL15Q9H469 300 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ZNF696Q9H7X3 374 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RHOFQ9HBH0 211 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 SCRT2Q9NQ03 307 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RRAGDQ9NQL2 400 aaPredicted RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 SLC2A9Q9NRM0 540 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 SPANXB1Q9NS25 103 aaPredicted RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 PCYOX1Q9UHG3 505 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 CD84Q9UIB8 345 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 VAX2Q9UIW0 290 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 RAB22AQ9UL26 194 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ZNF257Q9Y2Q1 563 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 ALG5Q9Y673 324 aa2.53□□□□□ -2
HERPUD1-211ENST00000566550 MARF1Q9Y4F3 1742 aaKnown RBP2.53□□□□□ -2
HERPUD1-211ENST00000566550 GLI3P10071 1580 aa2.53□□□□□ -2.01
HERPUD1-211ENST00000566550 BAHCC1Q9P281 2608 aa2.53□□□□□ -2.01
HERPUD1-211ENST00000566550 PRDM15P57071 1507 aaPredicted RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 KIAA0232Q92628 1395 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 TRAV8-6A0A0B4J262 113 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 A0A0J9YXY3 114 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 RBFOX3A6NFN3 312 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 METTL15A6NJ78 407 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 C21orf140B9A014 251 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 LINC01619G3V211 115 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CXCR6O00574 342 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CTDNEP1O95476 244 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 IGKV1D-16P01601 117 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CD74P04233 296 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 TCRBP04435 133 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ISG15P05161 165 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 PSMA1P25786 263 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 RBMXP38159 391 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CAPZBP47756 277 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 ZNF138P52744 262 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 CDKN2DP55273 166 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 LSM6P62312 80 aaKnown RBP2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 MS4A2Q01362 244 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 PAX8Q06710 450 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 EGFEM1PQ0D2K5 195 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 SMAGPQ0VAQ4 97 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 PRR4Q16378 134 aa2.52□□□□□ -2.01
HERPUD1-211ENST00000566550 GUCA2BQ16661 112 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms