RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 C1orf146Q5VVC0 180 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 HCP5Q6MZN7 132 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 PNKDQ8N490 385 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 CD177Q8N6Q3 437 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 OR51G2Q8NGK0 314 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 GABARAPL3Q9BY60 117 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 DPAGT1Q9H3H5 408 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 GPR173Q9NS66 373 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
CDH3-204ENST00000565453 ENOPH1Q9UHY7 261 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 GTF2A1LQ9UNN4 478 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 SNX5Q9Y5X3 404 aa12.82□□□□□ -0.36
CDH3-204ENST00000565453 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 A0A1W2PRD5 423 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 A0A1W2PRF3 423 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 A0A1W2PRM7 423 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 DHRS7CA6NNS2 312 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 J3QT63 122 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 FBP1P09467 338 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 HTR1FP30939 366 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 HAAOP46952 286 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 UBE2E1P51965 193 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 KRTAP10-3P60369 221 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 TMEM185AQ8NFB2 350 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 CITED1Q99966 193 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 METTL8Q9H825 291 aaKnown RBP12.81□□□□□ -0.36
CDH3-204ENST00000565453 HES4Q9HCC6 221 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
CDH3-204ENST00000565453 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
CDH3-204ENST00000565453 A0A1W2PQ09 198 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
CDH3-204ENST00000565453 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 EEF1B2P24534 225 aaKnown RBP12.8□□□□□ -0.36
CDH3-204ENST00000565453 MPZP25189 248 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 SAA4P35542 130 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 NCR3LG1Q68D85 454 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 TREML4Q6UXN2 200 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 CATSPERDQ86XM0 798 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 ZNF573Q86YE8 665 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 LINC01006Q8NI28 216 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
CDH3-204ENST00000565453 TBX5Q99593 518 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 OSBPL10Q9BXB5 764 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 C19orf12Q9NSK7 152 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 OAZ3Q9UMX2 235 aa12.8□□□□□ -0.36
CDH3-204ENST00000565453 A6NIN4 97 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 METTL15A6NJ78 407 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 RPP14O95059 124 aaKnown RBP12.79□□□□□ -0.36
CDH3-204ENST00000565453 APOL3O95236 402 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 KRT8P05787 483 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 PRDX2P32119 198 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 CEBPDP49716 269 aaPredicted RBP12.79□□□□□ -0.36
CDH3-204ENST00000565453 PROK1P58294 105 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 ERVK11-1P61568 191 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 ACSM1Q08AH1 577 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 Q6ZSV7 163 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 ASRGL1Q7L266 308 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 CALHM1Q8IU99 346 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 FAM185AQ8N0U4 392 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 C11orf42Q8N5U0 333 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 YIPF7Q8N8F6 280 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 ZSCAN4Q8NAM6 433 aaPredicted RBP12.79□□□□□ -0.36
CDH3-204ENST00000565453 OR2T27Q8NH04 317 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 RORBQ92753 470 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 EME1Q96AY2 570 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 VPREB3Q9UKI3 123 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 POLDIP2Q9Y2S7 368 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
CDH3-204ENST00000565453 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 SAC3D1A6NKF1 404 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 CLPXO76031 633 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 ISL1P61371 349 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 TMED1Q13445 227 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 BLMHQ13867 455 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 ANGPTL5Q86XS5 388 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 ZNF561Q8N587 486 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 OR8J1Q8NGP2 316 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 C17orf50Q8WW18 174 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 RNF166Q96A37 237 aaPredicted RBP12.78□□□□□ -0.36
CDH3-204ENST00000565453 PKIBQ9C010 78 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 RIBC2Q9H4K1 309 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 C16orf95Q9H693 158 aa12.78□□□□□ -0.36
CDH3-204ENST00000565453 ANKRD61A6NGH8 418 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 E9PQ18 207 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 H0YAE9 185 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 KCNAB3O43448 404 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 SULT1C4O75897 302 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 NXPH2O95156 264 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 CAPZA1P52907 286 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 ZNF85Q03923 595 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 IL24Q13007 206 aa12.77□□□□□ -0.37
CDH3-204ENST00000565453 UBE2V2Q15819 145 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms