RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CKLFQ9UBR5 152 aa13.38□□□□□ -0.27
RAB40C-208ENST00000564703 AKAP9Q99996 3911 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 IGHV3OR15-7A0A075B7D8 119 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 TRAV20A0A0B4J274 112 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 ADAM20O43506 726 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 SULT1B1O43704 296 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 ALX3O95076 343 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 GYPAP02724 150 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 DVL1P1P54792 670 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-208ENST00000564703 GABARAPL2P60520 117 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 GNB2P62879 340 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 PPP3R1P63098 170 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 IL24Q13007 206 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 GPR50Q13585 617 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 Q499Y3 187 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 SVOPQ8N4V2 548 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
RAB40C-208ENST00000564703 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-208ENST00000564703 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 LRRC42Q9Y546 428 aa13.37□□□□□ -0.27
RAB40C-208ENST00000564703 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 IGKV1-9A0A0C4DH69 117 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SYNGR1O43759 233 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 NXPH2O95156 264 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 PLATP00750 562 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 EGR1P18146 543 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 MAPK3P27361 379 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-208ENST00000564703 PITPNBP48739 271 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 NPY4RP50391 375 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 LCN2P80188 198 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 KRTAP1-1Q07627 177 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SLC25A26Q70HW3 274 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SLC36A1Q7Z2H8 476 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SATL1Q86VE3 508 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 FAM90A1Q86YD7 464 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 POC1AQ8NBT0 407 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 UFD1Q92890 307 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 TMEM186Q96B77 213 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 MED30Q96HR3 178 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SSBP3Q9BWW4 388 aaPredicted RBP13.36□□□□□ -0.27
RAB40C-208ENST00000564703 WDR13Q9H1Z4 485 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 ISYNA1Q9NPH2 558 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 HIF1ANQ9NWT6 349 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 NLKQ9UBE8 527 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 CLN8Q9UBY8 286 aa13.36□□□□□ -0.27
RAB40C-208ENST00000564703 HIVEP2P31629 2446 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 TEP1Q99973 2627 aaKnown RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 TRBV5-5A0A0J9YX44 114 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 TMPRSS2O15393 492 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 INMTO95050 263 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 MPZP25189 248 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 TGFBR2P37173 567 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 MAP2K4P45985 399 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 GABRA2P47869 451 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 POU3F4P49335 361 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 HOXA4Q00056 320 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 SMIM21Q3B7S5 101 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 FAHD2BQ6P2I3 314 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 CALHM1Q8IU99 346 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 RGP1Q92546 391 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 FAHD2AQ96GK7 314 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 PGLYRP3Q96LB9 341 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 GPER1Q99527 375 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 MGLLQ99685 303 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 OR5V1Q9UGF6 321 aa13.35□□□□□ -0.27
RAB40C-208ENST00000564703 LSM2Q9Y333 95 aaKnown RBP13.35□□□□□ -0.27
RAB40C-208ENST00000564703 MALRD1Q5VYJ5 2156 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TLN2Q9Y4G6 2542 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 OR2AT4A6NND4 320 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 ZNF879B4DU55 563 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 F5H0A9 414 aaPredicted RBP13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TRAPPC2LH3BP13 241 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 PHF1O43189 567 aaPredicted RBP13.34□□□□□ -0.27
RAB40C-208ENST00000564703 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TMEM225BP0DP42 221 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 HNF1AP20823 631 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 GATA3P23771 443 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TBCEQ15813 527 aaPredicted RBP13.34□□□□□ -0.27
RAB40C-208ENST00000564703 DCAF12L2Q5VW00 463 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 CD276Q5ZPR3 534 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 Q8IYB0 196 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 OR13C5Q8NGS8 318 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 SEH1LQ96EE3 360 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 CEP19Q96LK0 163 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 OR14A2Q96R54 314 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 CCL13Q99616 98 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TMED9Q9BVK6 235 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 DNTTIP1Q9H147 329 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 KAAG1Q9UBP8 84 aa13.34□□□□□ -0.27
RAB40C-208ENST00000564703 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.286e-6■■■■□ 23.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms