RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LOC110117498-PIK3R3F6TDL0 507 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 G3V2T6 193 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 J3QT63 122 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 PSMD9O00233 223 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SLC1A7O00341 560 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 KCNAB3O43448 404 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 PRKYO43930 277 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SRSF10O75494 262 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 TTRP02766 147 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 PGA5P0DJD9 388 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SELLP14151 372 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 PRDX2P32119 198 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SAA4P35542 130 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 DEFA6Q01524 100 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SRSF4Q08170 494 aaKnown RBP9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SLX4IPQ5VYV7 408 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 ASPHD2Q6ICH7 369 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 GID4Q8IVV7 300 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 SLC35F2Q8IXU6 374 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 ZNRF1Q8ND25 227 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 TMEM163Q8TC26 289 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 TCF7L1Q9HCS4 588 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 RAB18Q9NP72 206 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 KRT84Q9NSB2 600 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 CLN6Q9NWW5 311 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 FBLN5Q9UBX5 448 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 OR52A1Q9UKL2 312 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 COPS3Q9UNS2 423 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 R4GMQ9 66 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 V9GYS6 101 aa9.96□□□□□ -0.82
GTF3C1-204ENST00000564664 ANKRD61A6NGH8 418 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 RFPL4AA6NLU0 287 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 ZAR1LA6NP61 321 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 RFPL4AL1F8VTS6 287 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 ATP5HO75947 161 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 MRPL3P09001 348 aaKnown RBP9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 FCGR1AP12314 374 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 FAHP16930 419 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 MPZP25189 248 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 FASP25445 335 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 HAAOP46952 286 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 CAPZA1P52907 286 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 CXCR4P61073 352 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 RPL31P62899 125 aaKnown RBP9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 TMED1Q13445 227 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 ATP6AP1Q15904 470 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 PDLIM3Q53GG5 364 aaPredicted RBP9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 BCL2L15Q5TBC7 163 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 C12orf73Q69YU5 71 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 KDM4DQ6B0I6 523 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 ZDHHC13Q8IUH4 622 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 TCEANCQ8N8B7 351 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 TMEM185AQ8NFB2 350 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 APOL4Q9BPW4 351 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 RBM4BQ9BQ04 359 aaKnown RBP9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 NRIP2Q9BQI9 281 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 OSBPL10Q9BXB5 764 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 PKIBQ9C010 78 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 ADGRL4Q9HBW9 690 aa9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 WARS2Q9UGM6 360 aaKnown RBP9.95□□□□□ -0.82
GTF3C1-204ENST00000564664 A0A1B0GTI1 187 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 PQLC2LA1A4F0 135 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 PRR32B1ATL7 298 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 SULT1C4O75897 302 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 NXPH2O95156 264 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 OR2T7P0C7T2 308 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 CCL1P22362 96 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 KIR2DS4P43632 304 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 KRTAP10-3P60369 221 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 BNIP1Q12981 228 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 IL24Q13007 206 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 KLRD1Q13241 179 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 HCP5Q6MZN7 132 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 FAM185AQ8N0U4 392 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 CD177Q8N6Q3 437 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 OR51G2Q8NGK0 314 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 OR14K1Q8NGZ2 314 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 OR2T27Q8NH04 317 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 UBE2FQ969M7 185 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 PPP1R14AQ96A00 147 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 C10orf35Q96D05 121 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 SSX3Q99909 188 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 CDCA4Q9BXL8 241 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 CADM1Q9BY67 442 aaKnown RBP9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 GABARAPL1Q9H0R8 117 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 SEMA6AQ9H2E6 1030 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 HES4Q9HCC6 221 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 USE1Q9NZ43 259 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 SLC7A11Q9UPY5 501 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 AP4S1Q9Y587 144 aa9.94□□□□□ -0.82
GTF3C1-204ENST00000564664 A0A1W2PRD5 423 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 A0A1W2PRF3 423 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 A0A1W2PRM7 423 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 ANGPTL7O43827 346 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 SERPINA3P01011 423 aa9.93□□□□□ -0.82
GTF3C1-204ENST00000564664 RBP4P02753 201 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms