RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SNAP25P60880 206 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 NAB1Q13506 487 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF266Q14584 549 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 C16orf72Q14CZ0 275 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 PDK2Q15119 407 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 TMED2Q15363 201 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 CHRFAM7AQ494W8 412 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 TNFAIP8L3Q5GJ75 292 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 TTC19Q6DKK2 380 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 SMIM5Q71RC9 77 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 CBLN2Q8IUK8 224 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 CDKL3Q8IVW4 592 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF695Q8IW36 515 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 COX18Q8N8Q8 333 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 OR6Q1Q8NGQ2 317 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 COQ8AQ8NI60 647 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 SYNPRQ8TBG9 265 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 C15orf40Q8WUR7 153 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZBED3Q96IU2 234 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 JSRP1Q96MG2 331 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 PPP1R2P1Q96PQ5 205 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF317Q96PQ6 595 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF382Q96SR6 550 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 CYTH2Q99418 400 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 FOXC2Q99958 501 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 LHX5Q9H2C1 402 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 XKR8Q9H6D3 395 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF355PQ9NSJ1 428 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 CLN6Q9NWW5 311 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 AHSPQ9NZD4 102 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 MYEF2Q9P2K5 600 aaKnown RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 RCL1Q9Y2P8 373 aaKnown RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 NOSIPQ9Y314 301 aaKnown RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM14AQ9Y6G1 99 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 PAPPA2Q9BXP8 1791 aa2.84□□□□□ -1.96
LINC00560-201ENST00000564593 MROH7Q68CQ1 1323 aa2.84□□□□□ -1.96
LINC00560-201ENST00000564593 GOLGA8IPA6NC78 632 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 GOLGA8JA6NMD2 632 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 BCKDKO14874 412 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CCNE2O96020 404 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MRPL3P09001 348 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 RALBP11234 206 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 IL32P24001 234 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 PCK1P35558 622 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 ARL2P36404 184 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 RFC3P40938 356 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SLCO1A2P46721 670 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MARCKSL1P49006 195 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SERPINB9P50453 376 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CDKN2DP55273 166 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 RPS23P62266 143 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MRPS25P82663 173 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 IRF8Q02556 426 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 RAD51Q06609 339 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 DNAJC3Q13217 504 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 ART3Q13508 389 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 DGCR6Q14129 220 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 TRMT5Q32P41 509 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 DNAL1Q4LDG9 190 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SMUG1Q53HV7 270 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 TMEM205Q6UW68 189 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 NTM-AS1Q6ZSK4 140 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CALHM1Q8IU99 346 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 C1orf54Q8WWF1 131 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CDKL2Q92772 493 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 NRBF2Q96F24 287 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MCEEQ96PE7 176 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 TRABDQ9H4I3 376 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 ASB7Q9H672 318 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SAR1AQ9NR31 198 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 DOCK9Q9BZ29 2069 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MGAMO43451 1857 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 PCM1Q15154 2024 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 MYO18AQ92614 2054 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 IGLV4-60A0A075B6I1 120 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 IGKV2-28A0A075B6P5 120 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 hCG_1818297A0A087WSY0 165 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 A6NDN8 102 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SIGLEC16A6NMB1 481 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SYCE1LA8MT33 242 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 H7C1H1 209 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 TRDMT1O14717 391 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 RAD51BO15315 384 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 NVLO15381 856 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CCDC22O60826 627 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 VAMP5O95183 116 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 ATP6V1G2O95670 118 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 IGKV2D-28P01615 120 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SHBGP04278 402 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 CTSLP07711 333 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 OR56A5P0C7T3 313 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 NQO1P15559 274 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 BMI1P35226 326 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 SLC11A1P49279 550 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 LINC00315P59091 139 aa2.83□□□□□ -1.96
LINC00560-201ENST00000564593 TFAMQ00059 246 aaKnown RBP2.83□□□□□ -1.96
LINC00560-201ENST00000564593 LOXL1Q08397 574 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms