RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CDNFQ49AH0 187 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SMUG1Q53HV7 270 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SYT6Q5T7P8 510 aaPredicted RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 NELFCDQ8IXH7 590 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 Q8N9L7 120 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 CIRBP-AS1Q8TBR5 109 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 ENKURQ8TC29 256 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 NT5CQ8TCD5 201 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 DOK4Q8TEW6 326 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SERPINB11Q96P15 392 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 PSTPIP2Q9H939 334 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 EXOSC4Q9NPD3 245 aaKnown RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 RAB26Q9ULW5 256 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 FADS3Q9Y5Q0 445 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 USP42Q9H9J4 1324 aaKnown RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 PTPRGP23470 1445 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 NCOA1Q15788 1441 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 MAGI2Q86UL8 1455 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 NEO1Q92859 1461 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 KDM5BQ9UGL1 1544 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 NDUFC2-KCTD14E9PQ53 114 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 MYL12BO14950 172 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SNAI2O43623 268 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SPAG7O75391 227 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 CBR3O75828 277 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 ERFP50548 548 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 MYL6P60660 151 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 GNA13Q14344 377 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 KRTAP21-3Q3LHN1 58 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 TTC32Q5I0X7 151 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 RESP18Q5W5W9 173 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 ZNF470Q6ECI4 717 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 OPN5Q6U736 354 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 BHLHA15Q7RTS1 189 aaPredicted RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 SSX6Q7RTT6 188 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SH2D6Q7Z4S9 175 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 SELENOHQ8IZQ5 122 aaKnown RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 GAPTQ8N292 157 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 ZCCHC24Q8N2G6 241 aaKnown RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 DNAAF3Q8N9W5 541 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 CYB561A3Q8NBI2 242 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 OR10G2Q8NGC3 310 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 UBALD1Q8TB05 177 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 UBA3Q8TBC4 463 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 GHSRQ92847 366 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 S100PBPQ96BU1 408 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 MRPL48Q96GC5 212 aaKnown RBP1.61□□□□□ -2.15
CHD9-209ENST00000564255 ZNF382Q96SR6 550 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 PLA2G2FQ9BZM2 168 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 PRELID1Q9Y255 219 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 PPIL1Q9Y3C6 166 aa1.61□□□□□ -2.15
CHD9-209ENST00000564255 EVC2Q86UK5 1308 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 PBRM1Q86U86 1689 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CD109Q6YHK3 1445 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 PLA2R1Q13018 1463 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 TOP2AP11388 1531 aaKnown RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 ABCA10Q8WWZ4 1543 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 ADAMTS12P58397 1594 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 IGHV6-1A0A0B4J1U7 121 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 TRAV8-6A0A0B4J262 113 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 C5orf63A6NC05 138 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 ZNF233A6NK53 670 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CHST10O43529 356 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CCDC22O60826 627 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 SCN2BO60939 215 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 RANBP1P43487 201 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 TSPAN5P62079 268 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 TPM4P67936 248 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 SLAMF1Q13291 335 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 SNRNP35Q16560 246 aaKnown RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 ZNF684Q5T5D7 378 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 ZNF691Q5VV52 312 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 MDP1Q86V88 176 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 DRAM1Q8N682 238 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CYB561D1Q8N8Q1 229 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 RILPQ96NA2 401 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 COPS4Q9BT78 406 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 RSG1Q9BU20 258 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 SLC38A1Q9H2H9 487 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 ZNF430Q9H8G1 570 aaPredicted RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 TMEM100Q9NV29 134 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 MS4A12Q9NXJ0 267 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 IGSF9BQ9UPX0 1349 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 UPK1AO00322 258 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CDIPTO14735 213 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 EIF1BO60739 113 aaKnown RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 KLHL2O95198 593 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 LDOC1O95751 146 aaPredicted RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 SLC35E2BP0CK96 405 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 PSMB5P28074 263 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 HOXA6P31267 233 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 EIF1P41567 113 aaKnown RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 MAGEA3P43357 314 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 CXCL12P48061 93 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 BASP1P80723 227 aaKnown RBP1.6□□□□□ -2.15
CHD9-209ENST00000564255 LINC00303Q3SY05 128 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 ZFP2Q6ZN57 461 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 KRTAP11-1Q8IUC1 163 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 UBALD2Q8IYN6 164 aa1.6□□□□□ -2.15
CHD9-209ENST00000564255 RNF10Q8N5U6 811 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms