RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SCCPDHQ8NBX0 429 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ACBD4Q8NC06 268 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 KCNG3Q8TAE7 436 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 S100A16Q96FQ6 103 aaKnown RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 SDHCQ99643 169 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 GAL3ST1Q99999 423 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 PKIBQ9C010 78 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ATG5Q9H1Y0 275 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ELL3Q9HB65 397 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 CISD1Q9NZ45 108 aaKnown RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 A0A0A6YYD4 124 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 IGHV3-64DA0A0J9YX35 117 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 PLSCR5A0PG75 271 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 LRP5LA4QPB2 252 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 TMEM210A6NLX4 147 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 CRTAPO75718 401 aaPredicted RBP8.63□□□□□ -1.03
SMG1-208ENST00000563448 RHBDL1O75783 438 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 KDM4BO94953 1096 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 HTR3BO95264 441 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 GRPP07492 148 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 CDK2P24941 298 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 MPZP25189 248 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SERPINF1P36955 418 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 TALDO1P37837 337 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 CD200P41217 278 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 NPBWR2P48146 333 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ZNF81P51508 661 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 PPP5CP53041 499 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 IL24Q13007 206 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 IL18Q14116 193 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 RSU1Q15404 277 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 NKPD1Q17RQ9 610 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 MST1LQ2TV78 715 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SPRNQ5BIV9 151 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 PRAMEF6Q5VXH4 476 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 IZUMO1Q8IYV9 350 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 BATF2Q8N1L9 274 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 AQP3Q92482 292 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SLAMF9Q96A28 289 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 DHRS9Q9BPW9 319 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 NICN1Q9BSH3 213 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 SRRQ9GZT4 340 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 NKIRAS2Q9NYR9 191 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 MTCH1Q9NZJ7 389 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ADGRG4Q8IZF6 3080 aa8.63□□□□□ -1.03
SMG1-208ENST00000563448 ABCA4P78363 2273 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 A0A0G2JMP0 313 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 A0A0X1KG70 313 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 F8VVB4 439 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 F8VWA3 439 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 J3QT63 122 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 SPRY3O43610 288 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 IGHV1-46P01743 117 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 SFTPBP07988 381 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 MGMTP16455 207 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 BCL3P20749 454 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 PTBP1P26599 531 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMG1-208ENST00000563448 CD40LGP29965 261 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 DAZAP2Q15038 168 aaPredicted RBP8.62□□□□□ -1.03
SMG1-208ENST00000563448 MOGAT2Q3SYC2 334 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
SMG1-208ENST00000563448 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 TMEM200AQ86VY9 491 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 MKXQ8IYA7 352 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 OR4M2Q8NGB6 313 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 ELMOD3Q96FG2 381 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 ABHD1Q96SE0 405 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 TMEM59Q9BXS4 323 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 CST11Q9H112 138 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 TLNRD1Q9H1K6 362 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 KLF2Q9Y5W3 355 aaPredicted RBP8.62□□□□□ -1.03
SMG1-208ENST00000563448 DSCAMO60469 2012 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 PKDREJQ9NTG1 2253 aa8.62□□□□□ -1.03
SMG1-208ENST00000563448 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CDIPTO14735 213 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 XRCC3O43542 346 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ZNF780AO75290 641 aaPredicted RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 PTBP3O95758 552 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 PLA2G2AP14555 144 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 PITPNBP48739 271 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 PTH2RP49190 550 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 RPS27AP62979 156 aaKnown RBP8.61□□□□□ -1.03
SMG1-208ENST00000563448 GPR176Q14439 515 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 EFNB3Q15768 340 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 MPPED2Q15777 294 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ZNF826PQ6ZT77 177 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 SNX29P2Q8IUI4 249 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 Q8NFD4 153 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ZNF488Q96MN9 340 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 TM2D1Q9BX74 207 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 ZDHHC8Q9ULC8 765 aa8.61□□□□□ -1.03
SMG1-208ENST00000563448 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms