RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 MKXQ8IYA7 352 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 IZUMO1Q8IYV9 350 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 PAQR4Q8N4S7 273 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-202ENST00000563366 OR10R2Q8NGX6 335 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 S100PBPQ96BU1 408 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 C1orf147Q96MC9 270 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-202ENST00000563366 SPACA5Q96QH8 159 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 DMRTA2Q96SC8 542 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 ACTR6Q9GZN1 396 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 C11orf54Q9H0W9 315 aaPredicted RBP8.33□□□□□ -1.08
UBFD1-202ENST00000563366 RHOFQ9HBH0 211 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 NGBQ9NPG2 151 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 JKAMPQ9P055 326 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 ING4Q9UNL4 249 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 RBMX2Q9Y388 322 aaKnown RBP8.33□□□□□ -1.08
UBFD1-202ENST00000563366 LAMA5O15230 3695 aa8.33□□□□□ -1.08
UBFD1-202ENST00000563366 IGHV2OR16-5A0A0B4J2B6 119 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 TRGV8A0A0C4DH27 118 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 IGHV1-18A0A0C4DH31 117 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 A0A1W2PR80 420 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ANKRD20A5PA0PJZ0 165 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PQLC2LA1A4F0 135 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 IQCF6A8MYZ5 107 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 H7C417 338 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 RAB27BO00194 218 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PLA2G10O15496 165 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 TPD52L2O43399 206 aaKnown RBP8.32□□□□□ -1.08
UBFD1-202ENST00000563366 AKR7A2O43488 359 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ORC5O43913 435 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 CELA3BP08861 270 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 CD3GP09693 182 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 SERPINA2P20848 420 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 GCH1P30793 250 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 CBX5P45973 191 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 GNG3P63215 75 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 MZT1Q08AG7 82 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PDZK1IP1Q13113 114 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 SNTB2Q13425 540 aaKnown RBP8.32□□□□□ -1.08
UBFD1-202ENST00000563366 HLXQ14774 488 aaPredicted RBP8.32□□□□□ -1.08
UBFD1-202ENST00000563366 NKPD1Q17RQ9 610 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PNLIPRP3Q17RR3 467 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ZNF718Q3SXZ3 478 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 MTFR2Q6P444 385 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ASCL4Q6XD76 172 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 GDPD3Q7L5L3 318 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 NRARPQ7Z6K4 114 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 TMEM200AQ86VY9 491 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ZNF573Q86YE8 665 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 LIX1LQ8IVB5 337 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 FAM89BQ8N5H3 189 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 DTX3Q8N9I9 347 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ACBD4Q8NC06 268 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 DUSP18Q8NEJ0 188 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 OR5D18Q8NGL1 313 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 OR52I2Q8NH67 350 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PPP1R14BQ96C90 147 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 RAB3CQ96E17 227 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 MICU1Q9BPX6 476 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 RTL8AQ9BWD3 113 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 TM2D1Q9BX74 207 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 LPAR5Q9H1C0 372 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 DPAGT1Q9H3H5 408 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 KCNK15Q9H427 330 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 AUNIPQ9H7T9 357 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 ELL3Q9HB65 397 aaPredicted RBP8.32□□□□□ -1.08
UBFD1-202ENST00000563366 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBFD1-202ENST00000563366 NKIRAS2Q9NYR9 191 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 COQ3Q9NZJ6 369 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 MTFP1Q9UDX5 166 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 SH3BGRL2Q9UJC5 107 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 MEMO1Q9Y316 297 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 PIEZO2Q9H5I5 2752 aa8.32□□□□□ -1.08
UBFD1-202ENST00000563366 A0A1B0GVG6 124 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 MED19A0JLT2 244 aaPredicted RBP8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A10PA6NDY2 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A18PA6NE21 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A16PA6NEW6 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A20PA6NIJ5 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A8PA6NJQ4 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A7PA6NKC0 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 SERPINE3A8MV23 424 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A22PA8MWA6 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A12PA8MX19 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A5PA8MXJ8 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A23PA8MXZ1 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 H3BS24 57 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 PFDN1O60925 122 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 CA11O75493 328 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 AGFG2O95081 481 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 MELTFP08582 738 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A15PP0C7V4 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A13PP0C7W8 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A14PP0C7W9 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FAM90A24PP0C7X0 464 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 FOSL1P15407 271 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 TBPP20226 339 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 SLC6A1P30531 599 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 CHRNB4P30926 498 aa8.31□□□□□ -1.08
UBFD1-202ENST00000563366 RCVRNP35243 200 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms