RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OR10AC1Q8NH08 325 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 ADAT3Q96EY9 351 aaPredicted RBP13.1□□□□□ -0.31
USB1-208ENST00000563207 MGLLQ99685 303 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 PPP1R3EQ9H7J1 279 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 ESM1Q9NQ30 184 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 RNF7Q9UBF6 113 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 PCDHB10Q9UN67 800 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 NPTNQ9Y639 398 aa13.1□□□□□ -0.31
USB1-208ENST00000563207 A0A0G2JMP0 313 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 TRBV5-5A0A0J9YX44 114 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 A0A0X1KG70 313 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 A6NIN4 97 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 A6NLC8 198 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 ZNF205O95201 554 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 CPEP16870 476 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 PRKACBP22694 351 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 MAPK3P27361 379 aaPredicted RBP13.09□□□□□ -0.31
USB1-208ENST00000563207 CFPP27918 469 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 GPM6AP51674 278 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 ZMYND11Q15326 602 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 MPPED2Q15777 294 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 UBE2V2Q15819 145 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 PRAMEF6Q5VXH4 476 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 ZFP41Q8N8Y5 198 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 OR4M2Q8NGB6 313 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
USB1-208ENST00000563207 RGP1Q92546 391 aaPredicted RBP13.09□□□□□ -0.31
USB1-208ENST00000563207 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 ZCCHC4Q9H5U6 513 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
USB1-208ENST00000563207 PQLC2LA1A4F0 135 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 FSHBP01225 129 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 OCMP0CE72 109 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 ATF1P18846 271 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 CPT2P23786 658 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 PSMA1P25786 263 aaKnown RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 PMELP40967 661 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 MAP2K4P45985 399 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 HILS1P60008 231 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 RPS11P62280 158 aaKnown RBP eCLIP13.08□□□□□ -0.32
USB1-208ENST00000563207 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 UBE2UQ5VVX9 321 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 C11orf53Q8IXP5 236 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 MUC20Q8N307 709 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 SCCPDHQ8NBX0 429 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 ZNF671Q8TAW3 534 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 TMEM106AQ96A25 262 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 CPNE2Q96FN4 548 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
USB1-208ENST00000563207 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
USB1-208ENST00000563207 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 GPX5O75715 221 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 LHBP01229 141 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 ACAA1P09110 424 aaPredicted RBP13.07□□□□□ -0.32
USB1-208ENST00000563207 RBP2P50120 134 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 ATP1B3P54709 279 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 BTG1P62324 171 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 DOC2BQ14184 412 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 KCNJ8Q15842 424 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 C12orf54Q6X4T0 127 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 LHFPL2Q6ZUX7 228 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
USB1-208ENST00000563207 ZDHHC22Q8N966 263 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
USB1-208ENST00000563207 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 PKIBQ9C010 78 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 FGF23Q9GZV9 251 aaPredicted RBP13.07□□□□□ -0.32
USB1-208ENST00000563207 CKLFQ9UBR5 152 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 POLDIP2Q9Y2S7 368 aa13.07□□□□□ -0.32
USB1-208ENST00000563207 PPIAL4EA0A075B759 164 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 A0A087WXM4 84 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 A0A0A6YYJ9 748 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 ZNF879B4DU55 563 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 PPIAL4DF5H284 164 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 CDIPTO14735 213 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 SULT1B1O43704 296 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 PPIAL4FP0DN26 164 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 RAB3AP20336 220 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 MDH2P40926 338 aaKnown RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 HAAOP46952 286 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 SOX2P48431 317 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 ACTG1P63261 375 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
USB1-208ENST00000563207 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
USB1-208ENST00000563207 LIPKQ5VXJ0 399 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms