RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 OR4A5Q8NH83 315 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ZNF418Q8TF45 676 aaPredicted RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 ARHGAP9Q9BRR9 750 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 LMF2Q9BU23 707 aaKnown RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 SIRPDQ9H106 197 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 POLR2J3Q9H1A7 115 aaKnown RBP8.27□□□□□ -1.09
CDH1-205ENST00000562836 PRDM12Q9H4Q4 367 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 ENY2Q9NPA8 101 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 MED29Q9NX70 200 aa8.27□□□□□ -1.09
CDH1-205ENST00000562836 IGKV6D-41A0A0C4DH26 115 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 C13orf42A0A1B0GVH6 325 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 A0A1W2PRE2 83 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 OR51F1A6NGY5 319 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 UPK3BL1B0FP48 263 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 UPK3BL2E5RIL1 263 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 DEGS1O15121 323 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TNFSF14O43557 240 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 IFNA1P01562 189 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TTRP02766 147 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 ACP5P13686 325 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 GRPRP30550 384 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 C1DQ13901 141 aaKnown RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 EIF2B1Q14232 305 aaKnown RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 C11orf87Q6NUJ2 197 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 SLC27A1Q6PCB7 646 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 APOOLQ6UXV4 268 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 RPS27LQ71UM5 84 aaKnown RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 AMIGO3Q86WK7 504 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 LRRC75A-AS1Q8N1F1 130 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 ADAD2Q8NCV1 583 aaKnown RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 RSPRY1Q96DX4 576 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 A4GALTQ9NPC4 353 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 PRSS50Q9UI38 385 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 WIPI2Q9Y4P8 454 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 hCG_1818297A0A087WSY0 165 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 IGLC7A0M8Q6 106 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 GXYLT2A0PJZ3 443 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 PRR19A6NJB7 356 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 NPIPB13A6NJU9 1138 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 MEIS3P2A8K0S8 358 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 NPIPB4C9JG80 1138 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 C3orf80F5H4A9 247 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 H0YIG0 161 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TMPRSS2O15393 492 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 P2RX6O15547 441 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 BNIP3LO60238 219 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 SOD1P00441 154 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 C1QTNF9P0C862 333 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 MYF5P13349 255 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 USF1P22415 310 aaPredicted RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 RRADP55042 308 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 RUNX1Q01196 453 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 LINC00303Q3SY05 128 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TIGITQ495A1 244 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 SPATA45Q537H7 98 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 FFAR4Q5NUL3 377 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TMPRSS12Q86WS5 348 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 DTX1Q86Y01 620 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 TMEM123Q8N131 208 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 MUC20Q8N307 709 aaPredicted RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 INO80EQ8NBZ0 244 aaPredicted RBP8.26□□□□□ -1.09
CDH1-205ENST00000562836 OR10G4Q8NGN3 311 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 BTF3L4Q96K17 158 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 HCAR1Q9BXC0 346 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 OR11A1Q9GZK7 315 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 OR52D1Q9H346 318 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 KLHL13Q9P2N7 655 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 COQ4Q9Y3A0 265 aa8.26□□□□□ -1.09
CDH1-205ENST00000562836 NINQ8N4C6 2090 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 CDC14CA4D256 554 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 FOXI3A8MTJ6 420 aaPredicted RBP8.25□□□□□ -1.09
CDH1-205ENST00000562836 GRXCR1A8MXD5 290 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 YPEL1O60688 119 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 SBK3P0C264 359 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 PRPH2P23942 346 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 ZNF133P52736 654 aaPredicted RBP8.25□□□□□ -1.09
CDH1-205ENST00000562836 SLC16A1P53985 500 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 PRSS12P56730 875 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 PLK5Q496M5 336 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 RAB41Q5JT25 222 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 FAM69BQ5VUD6 431 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 OR2T5Q6IEZ7 315 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 SHISA5Q8N114 240 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 OR4N2Q8NGD1 307 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 OR2T29Q8NH02 315 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 UHRF2Q96PU4 802 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 YPEL2Q96QA6 119 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 ST6GALNAC5Q9BVH7 336 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 TBC1D17Q9HA65 648 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 CDH20Q9HBT6 801 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 OR1A1Q9P1Q5 309 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 NTNG1Q9Y2I2 539 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 NPEPPSL1A6NEC2 478 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 CSN2P05814 226 aa8.25□□□□□ -1.09
CDH1-205ENST00000562836 TSPOP30536 169 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms