RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 DANCRP0C864 163 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 OR5H8P0DN80 308 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 GLI4P10075 376 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 CSNK1EP49674 416 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 CHAF1BQ13112 559 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 FAM209BQ5JX69 171 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 FAM69BQ5VUD6 431 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 RTL6Q6ICC9 239 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 COMMD1Q8N668 190 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC38A9Q8NBW4 561 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 OR6X1Q8NH79 312 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 POC1BQ8TC44 478 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 C19orf12Q9NSK7 152 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 METTL1Q9UBP6 276 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 PIGLQ9Y2B2 252 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 IGHV1OR21-1A0A087WYE8 117 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 HEXBP07686 556 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 SEC11BP0C7V7 166 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 HAAOP46952 286 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 CFHR1Q03591 330 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF600Q6ZNG1 722 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 D2HGDHQ8N465 521 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 HSD17B11Q8NBQ5 300 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC22A8Q8TCC7 542 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 KCNJ16Q9NPI9 418 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ANXA10Q9UJ72 324 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 LMO7DNF2Z398 122 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 RRADP55042 308 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 FXYD4P59646 89 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SHHQ15465 462 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 CRIP3Q6Q6R5 217 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC25A43Q8WUT9 341 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 TCTEX1D2Q8WW35 142 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 OXGR1Q96P68 337 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 TUBA4BQ9H853 241 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 MIOXQ9UGB7 285 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 MED12Q93074 2177 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SPEGQ15772 3267 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 TLX3O43711 291 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 DUX1O43812 170 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 DHRS3O75911 302 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 OR5AC1P0C628 307 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 MYF5P13349 255 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 EN2P19622 333 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 KLK2P20151 261 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 OPRM1P35372 400 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SULT1A1P50225 295 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 CLDN17P56750 224 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 POLR2GP62487 172 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 RSPO4Q2I0M5 234 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 TMEM176BQ3YBM2 270 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 ANKRD37Q7Z713 158 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 PPP1R3BQ86XI6 285 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF565Q8N9K5 539 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC39A7Q92504 469 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 FAAP24Q9BTP7 215 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SH3BGRL3Q9H299 93 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 WFDC1Q9HC57 220 aa12.23□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF728P0DKX0 622 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 HNRNPKP61978 463 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC35A1P78382 337 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PPA1Q15181 289 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 TSPO2Q5TGU0 170 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 LRRC18Q8N456 261 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 TMEM156Q8N614 296 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 HAS2Q92819 552 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 TAAR9Q96RI9 348 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PBDC1Q9BVG4 233 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 NXT1Q9UKK6 140 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 RRP8O43159 456 aaKnown RBP12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 GPR137BO60478 399 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 MSX1P28360 303 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 P2RY1P47900 373 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF133P52736 654 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PHLDA2Q53GA4 152 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PLXDC2Q6UX71 529 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 OR10G3Q8NGC4 313 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 OR1J1Q8NGS3 322 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PP6455Q8WZ26 134 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 FER1L5A0AVI2 2057 aa12.22□□□□□ -0.45
VPS9D1-202ENST00000561976 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 ITGA3P26006 1051 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 CD27P26842 260 aa12.21□□□□□ -0.45
VPS9D1-202ENST00000561976 EIF1P41567 113 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms