RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CD300CQ08708 224 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 PMPCAQ10713 525 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 GK2Q14410 553 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 KISS1Q15726 138 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 GSG1Q2KHT4 349 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF260Q3ZCT1 412 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 RNASE12Q5GAN4 147 aaKnown RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 DMRTC1Q5HYR2 192 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 CLVS2Q5SYC1 327 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 C1orf185Q5T7R7 199 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF57Q68EA5 555 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF585AQ6P3V2 769 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 PCSK4Q6UW60 755 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 GLIPR1L1Q6UWM5 242 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 MEX3BQ6ZN04 569 aaKnown RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 RTN4RL2Q86UN3 420 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 CCDC36Q8IYA8 594 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF101Q8IZC7 436 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 FAM89BQ8N5H3 189 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 FAM57AQ8TBR7 257 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 C15orf40Q8WUR7 153 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 AKAP1Q92667 903 aaKnown RBP eCLIP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 PIGTQ969N2 578 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 APOBEC3DQ96AK3 386 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 SPSB1Q96BD6 273 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 UPRTQ96BW1 309 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 SEH1LQ96EE3 360 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 WBP1Q96G27 269 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 PLPPR2Q96GM1 343 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 C7orf50Q9BRJ6 194 aaKnown RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ATG5Q9H1Y0 275 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 HRASLSQ9HDD0 168 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 DIABLOQ9NR28 239 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 GPR173Q9NS66 373 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 MYEF2Q9P2K5 600 aaKnown RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 KLK11Q9UBX7 282 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ELF5Q9UKW6 265 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ANAPC10Q9UM13 185 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF835Q9Y2P0 537 aa5.62□□□□□ -1.51
CAPN3-210ENST00000561817 MRPS28Q9Y2Q9 187 aaKnown RBP5.62□□□□□ -1.51
CAPN3-210ENST00000561817 PIEZO2Q9H5I5 2752 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF816-ZNF321PA0A0X1KG74 233 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 A0A1W2PP11 408 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 PYCARD-AS1I3L0S3 204 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 SSX5O60225 188 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CDC14BO60729 498 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 PFDN1O60925 122 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 LYZL6O75951 148 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CST4P01036 141 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 IGKV3-15P01624 115 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 IGLV1-44P01699 117 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 TPOP07202 933 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 HOXD4P09016 255 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 UBBP0CG47 229 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 GLI4P10075 376 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CBR1P16152 277 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 PRKACBP22694 351 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 ARL3P36405 182 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 BTG1P62324 171 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 RPS27AP62979 156 aaKnown RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 SSBP1Q04837 148 aaKnown RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 KLRB1Q12918 225 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CBX3Q13185 183 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 DAZAP2Q15038 168 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 TSC22D1Q15714 1073 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 PLAC9Q5JTB6 97 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 AGAP6Q5VW22 663 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 AWAT2Q6E213 333 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF474Q6S9Z5 364 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 RFPL4BQ6ZWI9 263 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 ZNF554Q86TJ5 538 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CDH24Q86UP0 819 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 TOMM5Q8N4H5 51 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CNEP1R1Q8N9A8 125 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 FCAMRQ8WWV6 532 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 CMBLQ96DG6 245 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 NEIL1Q96FI4 390 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 TXN2Q99757 166 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 NICN1Q9BSH3 213 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 TM2D1Q9BX74 207 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 OPN3Q9H1Y3 402 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-210ENST00000561817 SCPEP1Q9HB40 452 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 NPAP1Q9NZP6 1156 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 NLKQ9UBE8 527 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 GHRLQ9UBU3 117 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 KCNK7Q9Y2U2 307 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 SESN1Q9Y6P5 492 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 ZZEF1O43149 2961 aa5.61□□□□□ -1.51
CAPN3-210ENST00000561817 NBEAQ8NFP9 2946 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 IGKV1-12A0A0C4DH73 117 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 FAM240BA0A1B0GVZ2 78 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 PQLC2LA1A4F0 135 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 C7orf66A4D0T2 115 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 NUDT19A8MXV4 375 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 MFNGO00587 321 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 RGS13O14921 159 aa5.6□□□□□ -1.51
CAPN3-210ENST00000561817 SOCS1O15524 211 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms