RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HHLA2Q9UM44 414 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 INSIG2Q9Y5U4 225 aa8.43□□□□□ -1.06
HERC1-212ENST00000561348 IGHV2-70DA0A0C4DH43 119 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 OR2AT4A6NND4 320 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 RNF212BA8MTL3 300 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 SRRM5B3KS81 715 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 J3QT63 122 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 HCKP08631 526 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
HERC1-212ENST00000561348 LIMS3P0CW19 117 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 SELLP14151 372 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 EPHA1P21709 976 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 CCL1P22362 96 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 GATA3P23771 443 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 CEBPDP49716 269 aaPredicted RBP8.42□□□□□ -1.06
HERC1-212ENST00000561348 FUT6P51993 359 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 MTCP1P56278 107 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 UBE2V2Q15819 145 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 LRRC10Q5BKY1 277 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 CD276Q5ZPR3 534 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 BTN2A1Q7KYR7 527 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 SATL1Q86VE3 508 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 PDZD9Q8IXQ8 264 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 SYS1Q8N2H4 156 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 TEX29Q8N6K0 151 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 OR5D18Q8NGL1 313 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 OR13C9Q8NGT0 318 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 OR10Z1Q8NGY1 313 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 AQP3Q92482 292 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 GGHQ92820 318 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 SLAMF9Q96A28 289 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 TLNRD1Q9H1K6 362 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 FGF20Q9NP95 211 aaPredicted RBP8.42□□□□□ -1.06
HERC1-212ENST00000561348 DHDHQ9UQ10 334 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 POLDIP2Q9Y2S7 368 aa8.42□□□□□ -1.06
HERC1-212ENST00000561348 EXOSC1Q9Y3B2 195 aaKnown RBP8.42□□□□□ -1.06
HERC1-212ENST00000561348 TRAV40A0A0B4J280 105 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 A0A1W2PQ09 198 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 PQLC2LA1A4F0 135 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 EFCAB10A6NFE3 127 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 RFPL4AA6NLU0 287 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 TMEM212A6NML5 194 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 OR4C45A6NMZ5 311 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 C22orf46C9J442 243 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 RFPL4AL1F8VTS6 287 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 MYL12BO14950 172 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 SPRY1O43609 319 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 TCF21O43680 179 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 ZFPL1O95159 310 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 CYB5AP00167 134 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 CCDC159P0C7I6 412 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ATF1P18846 271 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 AZGP1P25311 298 aaKnown RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 RBP2P50120 134 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 NPY4RP50391 375 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 CCR9P51686 369 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ATP1B3P54709 279 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 FGF12P61328 243 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ARF6P62330 175 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 IL13RA1P78552 427 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 PRB3Q04118 309 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 SMIM21Q3B7S5 101 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 TEX36Q5VZQ5 186 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 XAF1Q6GPH4 301 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 IZUMO2Q6UXV1 221 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ZNF841Q6ZN19 808 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 SLC25A26Q70HW3 274 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 CALHM1Q8IU99 346 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 ZNRF1Q8ND25 227 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 PP6455Q8WZ26 134 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 GPER1Q99527 375 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 SLC6A7Q99884 636 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 CHST5Q9GZS9 411 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 MS4A7Q9GZW8 240 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 ELL3Q9HB65 397 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 SLC25A10Q9UBX3 287 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 OPN4Q9UHM6 478 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 DIMT1Q9UNQ2 313 aaKnown RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 CAB39Q9Y376 341 aaPredicted RBP8.41□□□□□ -1.06
HERC1-212ENST00000561348 HSPE1-MOB4S4R3N1 261 aa8.41□□□□□ -1.06
HERC1-212ENST00000561348 KIR2DS1A0A191URI9 304 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 MEX3AA1L020 520 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 DHRS7CA6NNS2 312 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 A8MXK9 166 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 ANGPTL7O43827 346 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 TOX4O94842 621 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 SFTPBP07988 381 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 PSG2P11465 335 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 PRKACBP22694 351 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 FPR2P25090 351 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 DUSP1P28562 367 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 C21orf33P30042 268 aaPredicted RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 SCN1BQ07699 218 aa8.4□□□□□ -1.06
HERC1-212ENST00000561348 MRPL28Q13084 256 aaKnown RBP8.4□□□□□ -1.06
HERC1-212ENST00000561348 FAM76BQ5HYJ3 339 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms