RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MRPS18BQ9Y676 258 aaKnown RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 SYNJ1O43426 1573 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 ABCC8Q09428 1581 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 CFTRP13569 1480 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 SMARCA4P51532 1647 aa1.62□□□□□ -2.15
RTF1-207ENST00000561076 COL22A1Q8NFW1 1626 aaPredicted RBP1.62□□□□□ -2.15
RTF1-207ENST00000561076 MTUS2Q5JR59 1369 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TNRQ92752 1358 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MROH2BQ7Z745 1585 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SOGA1O94964 1423 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ADGRL3Q9HAR2 1447 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 IGHV1OR15-1A0A075B7D0 117 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 IGKV1D-13A0A0B4J2D9 117 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 A0A1B0GV50 99 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 RBFOX3A6NFN3 312 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CLDN24A6NM45 220 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 C2orf74A8MZ97 194 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FAM220BPB1ANY3 271 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MANBAO00462 879 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CHP2O43745 196 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 NDUFS5O43920 106 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FADS1O60427 444 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SNAP91O60641 907 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PLIN3O60664 434 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ZG16O60844 167 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 NOS1APO75052 506 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 CNMDO75829 334 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ARL6IP5O75915 188 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 GABARAPO95166 117 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A14O95258 325 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 HBZP02008 142 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CD74P04233 296 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SEMG1P04279 462 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MELTFP08582 738 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR4A8P0C604 315 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SCGB1C2P0DMR2 95 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 IGKV1-13P0DP09 117 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SELEP16581 610 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ALOX5APP20292 161 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 TAC1P20366 129 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 GABRR1P24046 479 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PRTN3P24158 256 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PAX6P26367 422 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MYCNOSP40205 109 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PMELP40967 661 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A1P53007 311 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 PSME3P61289 254 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ERVS71-1P61550 626 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 HERVK_113P61574 105 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 GTF2BQ00403 316 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 C1DQ13901 141 aaKnown RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 FZD2Q14332 565 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 EDDM3AQ14507 147 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ZNF235Q14590 738 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 RSU1Q15404 277 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ACSBG2Q5FVE4 666 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 UBE2NLQ5JXB2 153 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ADAMTSL4-AS1Q5T5F5 129 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 C1orf195Q5TG92 126 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MARC1Q5VT66 337 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 RSBN1Q5VWQ0 802 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 LEMD1Q68G75 181 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FAM53AQ6NSI3 398 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 XKRXQ6PP77 449 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 REG3GQ6UW15 175 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CLEC19AQ6UXS0 136 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CASP12Q6UXS9 341 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SCGB1D4Q6XE38 83 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 Q6ZPA2 131 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 DGAT2L6Q6ZPD8 337 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 RNF165Q6ZSG1 346 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 HIST2H3AQ71DI3 136 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FAM220AQ7Z4H9 259 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 FAM19A5Q7Z5A7 132 aaPredicted RBP1.61□□□□□ -2.15
RTF1-207ENST00000561076 FAM19A1Q7Z5A9 133 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 S100A7AQ86SG5 101 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 RIMKLAQ8IXN7 391 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR6V1Q8N148 313 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 C6orf223Q8N319 242 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 NATD1Q8N6N6 113 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 CLDN22Q8N7P3 220 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SLC35G3Q8N808 338 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ZNF614Q8N883 585 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 Q8NBF4 154 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 ZNF485Q8NCK3 441 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 GPR26Q8NDV2 337 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 MDS2Q8NDY4 140 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SLC26A10Q8NG04 563 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR10W1Q8NGF6 305 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR6T1Q8NGN1 323 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR10G9Q8NGN4 311 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR11L1Q8NGX0 322 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR6K3Q8NGY3 331 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR10J6PQ8NGY7 276 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR13G1Q8NGZ3 307 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR4S2Q8NH73 311 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 OR10G6Q8NH81 332 aa1.61□□□□□ -2.15
RTF1-207ENST00000561076 SCGB1C1Q8TD33 95 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms