RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RPS17P08708 135 aaKnown RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 BRS3P32247 399 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 BMI1P35226 326 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 MAGEA12P43365 314 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 CAV3P56539 151 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 DYNC1I2Q13409 638 aaKnown RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 IL18R1Q13478 541 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 PQLC2Q6ZP29 291 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 ZNF826PQ6ZT77 177 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 RPS27LQ71UM5 84 aaKnown RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 NET1Q7Z628 596 aaPredicted RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 SLC35E3Q7Z769 313 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 ZNF440Q8IYI8 595 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 PARP16Q8N5Y8 322 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 SLC25A44Q96H78 314 aaPredicted RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 TEX37Q96LM6 180 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 FMO2Q99518 471 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 GON7Q9BXV9 100 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 PNRC2Q9NPJ4 139 aaKnown RBP4.81□□□□□ -1.64
HERC1-208ENST00000560462 PRDM4Q9UKN5 801 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 NDUFAF1Q9Y375 327 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 TIMM10BQ9Y5J6 103 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 COMMD3-BMI1R4GMX3 469 aa4.81□□□□□ -1.64
HERC1-208ENST00000560462 IGLV2-18A0A075B6J9 118 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 MSGN1A6NI15 193 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 A8MT66 165 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 HSPB6O14558 160 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 LSM1O15116 133 aaKnown RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 TBX19O60806 448 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SMIM24O75264 130 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 PTBP3O95758 552 aaKnown RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 IFNA14P01570 189 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 GUSBP08236 651 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 RBP1P09455 135 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 PGA4P0DJD7 388 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 PGA3P0DJD8 388 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SERPINB9P50453 376 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 XGP55808 180 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 NANOS2P60321 138 aaKnown RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 PCBD1P61457 104 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 GNB1P62873 340 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 RUNX1Q01196 453 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 OR8G1Q15617 311 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SGCAQ16586 387 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 DGUOKQ16854 277 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 WHAMMP3Q1A5X7 153 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 C6orf120Q7Z4R8 191 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 OR5L1Q8NGL2 311 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 OR13D1Q8NGV5 346 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 FAM76AQ8TAV0 307 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 NDNFQ8TB73 568 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SLC38A4Q969I6 547 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 C12orf43Q96C57 262 aaKnown RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 RASD2Q96D21 266 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SLC41A3Q96GZ6 507 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 MED30Q96HR3 178 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 RITA1Q96K30 269 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 ZNF570Q96NI8 536 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 OR5B12Q96R08 314 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 DPY30Q9C005 99 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 PPIL3Q9H2H8 161 aaKnown RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 OR51J1Q9H342 316 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 ZCCHC4Q9H5U6 513 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 REEP4Q9H6H4 257 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 SRD5A3Q9H8P0 318 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 ELL3Q9HB65 397 aaPredicted RBP4.8□□□□□ -1.64
HERC1-208ENST00000560462 P2RX2Q9UBL9 471 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 ZNF391Q9UJN7 358 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 TMCO1Q9UM00 188 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 MOB4Q9Y3A3 225 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 FBXO7Q9Y3I1 522 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 MINOS1-NBL1R4GNA1 71 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 HSPE1-MOB4S4R3N1 261 aa4.8□□□□□ -1.64
HERC1-208ENST00000560462 A0A087WUV0 522 aaPredicted RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 EXOC1LA0A1B0GW35 172 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 NPIPB8E9PQR5 432 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 RHODO00212 210 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 RGS11O94810 467 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 NDUFB4O95168 129 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 IGHG2P01859 326 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 GKN3PP0CG01 181 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 P0DMU3 169 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 FAM231AP0DMU4 169 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 FAM231CP0DMU5 169 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 HMOX2P30519 316 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 DCTDP32321 178 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 CD81P60033 236 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 STX1BP61266 288 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 GNA13Q14344 377 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 ZNF124Q15973 351 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 MRPL2Q5T653 305 aaKnown RBP4.79□□□□□ -1.64
HERC1-208ENST00000560462 ATAD3BQ5T9A4 648 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 GGNBP1Q5YKI7 109 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 STUMQ69YW2 141 aa4.79□□□□□ -1.64
HERC1-208ENST00000560462 SIGIRRQ6IA17 410 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms