RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 THBS2P35442 1172 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SERPINF1P36955 418 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ETV6P41212 452 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ALDH3B1P43353 468 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 NR4A2P43354 598 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 HAAOP46952 286 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SRP9P49458 86 aaKnown RBP5.49□□□□□ -1.53
SPG11-221ENST00000560299 GPM6AP51674 278 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CLDN12P56749 244 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PDZK1IP1Q13113 114 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SNTB1Q13884 538 aaKnown RBP5.49□□□□□ -1.53
SPG11-221ENST00000560299 ARL6IP1Q15041 203 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CDSNQ15517 529 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ADAM5Q6NVV9 412 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 FAM131AQ6UXB0 335 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CDH24Q86UP0 819 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 LAX1Q8IWV1 398 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 Q8IYB0 196 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SAXO1Q8IYX7 474 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 FBXL14Q8N1E6 418 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PXT1Q8NFP0 134 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 OR4D6Q8NGJ1 314 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 OR51F2Q8NH61 342 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 LGALS14Q8TCE9 139 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 FAM46BQ96A09 425 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 RFT1Q96AA3 541 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ITPKCQ96DU7 683 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 MRPS24Q96EL2 167 aaKnown RBP5.49□□□□□ -1.53
SPG11-221ENST00000560299 PIK3IP1Q96FE7 263 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SPACA5Q96QH8 159 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 DHRS9Q9BPW9 319 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 SYT3Q9BQG1 590 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PKIBQ9C010 78 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ATG5Q9H1Y0 275 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 ABCG5Q9H222 651 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 RHBDL2Q9NX52 303 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 CISD1Q9NZ45 108 aaKnown RBP5.49□□□□□ -1.53
SPG11-221ENST00000560299 EXTL2Q9UBQ6 330 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 OR5V1Q9UGF6 321 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 MYO9AB2RTY4 2548 aa5.49□□□□□ -1.53
SPG11-221ENST00000560299 PLCE1Q9P212 2302 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ANKRD17O75179 2603 aaKnown RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 PDZD2O15018 2839 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 A0A0B4J203 849 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TMEM272A0A1B0GTI8 110 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 A6NLC8 198 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 SHISA9B4DS77 424 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 B9A039 149 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 PYCARD-AS1I3L0S3 204 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 J3QT63 122 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 M0R233 179 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TPD52L2O43399 206 aaKnown RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 CRTAPO75718 401 aaPredicted RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 HTR3BO95264 441 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 NAT2P11245 290 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ELK1P19419 428 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TNFRSF1AP19438 455 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 MNDAP41218 407 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 OR3A4PP47883 348 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 PITPNBP48739 271 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ZNF81P51508 661 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 MMP15P51511 669 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 PPP5CP53041 499 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ZP1P60852 638 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 IL24Q13007 206 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 IL18Q14116 193 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ADIPOQQ15848 244 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ALKBH6Q3KRA9 238 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ZNF672Q499Z4 452 aaPredicted RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 SLC22A6Q4U2R8 563 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 FAM76BQ5HYJ3 339 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 DMRTC1Q5HYR2 192 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 FAM209AQ5JX71 171 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TMEM69Q5SWH9 247 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 PYHIN1Q6K0P9 492 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 C16orf87Q6PH81 154 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 CNIH2Q6PI25 160 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 HAGHLQ6PII5 290 aaPredicted RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 FIP1L1Q6UN15 594 aaKnown RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 ASCL4Q6XD76 172 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 MEX3BQ6ZN04 569 aaKnown RBP5.48□□□□□ -1.53
SPG11-221ENST00000560299 SLC25A26Q70HW3 274 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 CCDC190Q86UF4 302 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 TMEM200AQ86VY9 491 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 LYPD6Q86Y78 171 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ZNF295-AS1Q8N0V1 137 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 CELF2-AS1Q8N7Q2 184 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ZNF611Q8N823 705 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 GDPD1Q8N9F7 314 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 OR2Z1Q8NG97 314 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 OR56B1Q8NGI3 324 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 OR5D18Q8NGL1 313 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 OR5H6Q8NGV6 325 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 HPSE2Q8WWQ2 592 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 NINJ1Q92982 152 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 BORCS5Q969J3 196 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 FBXW5Q969U6 566 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 ERGIC1Q969X5 290 aa5.48□□□□□ -1.53
SPG11-221ENST00000560299 SLC25A28Q96A46 364 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms