RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 METTL9Q9H1A3 318 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 MYOZ1Q9NP98 299 aaPredicted RBP15.38■□□□□ 0.05
SNX1-208ENST00000559844 DLL4Q9NR61 685 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 GLRX2Q9NS18 164 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 ANAPC10Q9UM13 185 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 BOLA1Q9Y3E2 137 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 HIVEP3Q5T1R4 2406 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 A0A1W2PP11 408 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 MFNGO00587 321 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 SSX5O60225 188 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 SERPINA2P20848 420 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 RBP2P50120 134 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 TMEM50BP56557 158 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 ZNF92Q03936 586 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 EIF2S3LQ2VIR3 472 aaKnown RBP15.38■□□□□ 0.05
SNX1-208ENST00000559844 ACTBL2Q562R1 376 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 PLAC9Q5JTB6 97 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 C1QL2Q7Z5L3 287 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 OR4S1Q8NGB4 309 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 MGAT4CQ9UBM8 478 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 SLC7A11Q9UPY5 501 aa15.38■□□□□ 0.05
SNX1-208ENST00000559844 ZNF816-ZNF321PA0A0X1KG74 233 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 TMEM82A0PJX8 343 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 MBD3L4A6NDZ8 208 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 MBD3L3A6NE82 208 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 MBD3L5A6NJ08 208 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 TMEM225BP0DP42 221 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 NAT1P18440 290 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 MPGP29372 298 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 GCNT2Q8N0V5 402 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 MBD3L2Q8NHZ7 208 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 ZNF431Q8TF32 576 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 NANOS1Q8WY41 292 aaKnown RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 GMPPAQ96IJ6 420 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 SLC6A7Q99884 636 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 ELL3Q9HB65 397 aaPredicted RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 KCNN3Q9UGI6 736 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 KCNK7Q9Y2U2 307 aa15.37■□□□□ 0.05
SNX1-208ENST00000559844 DIDO1Q9BTC0 2240 aaKnown RBP15.37■□□□□ 0.05
SNX1-208ENST00000559844 FAM230AA0A1W2PPH8 454 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 CA11O75493 328 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 HLA-HP01893 362 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 GLI4P10075 376 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 CD79AP11912 226 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 FOXG1P55316 489 aaPredicted RBP15.36■□□□□ 0.05
SNX1-208ENST00000559844 PER3P56645 1201 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 PLP2Q04941 152 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 PPA1Q15181 289 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 DMRTC1Q5HYR2 192 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 FBXW9Q5XUX1 488 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 GVQW1Q8N7I0 195 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 OCSTAMPQ9BR26 566 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 MEMO1Q9Y316 297 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 FOXI3A8MTJ6 420 aaPredicted RBP15.36■□□□□ 0.05
SNX1-208ENST00000559844 CCL21O00585 134 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 ZNF780AO75290 641 aaPredicted RBP15.36■□□□□ 0.05
SNX1-208ENST00000559844 TOXO94900 526 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 GIPP09681 153 aaPredicted RBP15.36■□□□□ 0.05
SNX1-208ENST00000559844 OR3A2P47893 321 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 FUT6P51993 359 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 ATP1B3P54709 279 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 SCGB2B2Q4G0G5 96 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 NLRC3Q7RTR2 1065 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 APOBEC3DQ96AK3 386 aaPredicted RBP15.36■□□□□ 0.05
SNX1-208ENST00000559844 ARHGAP5-AS1Q96IT6 56 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 VKORC1Q9BQB6 163 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 POFUT1Q9H488 388 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 PRSS50Q9UI38 385 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 MGAT4AQ9UM21 535 aa15.36■□□□□ 0.05
SNX1-208ENST00000559844 RELNP78509 3460 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 FREM1Q5H8C1 2179 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 LOC100509620A0A075B734 347 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 SERPINE3A8MV23 424 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 SS18L1O75177 396 aaPredicted RBP15.35■□□□□ 0.05
SNX1-208ENST00000559844 IL2RAP01589 272 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 CSTBP04080 98 aaKnown RBP15.35■□□□□ 0.05
SNX1-208ENST00000559844 IFNA6P05013 189 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 SERPINA5P05154 406 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 DNASE1P24855 282 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 BLVRBP30043 206 aaPredicted RBP15.35■□□□□ 0.05
SNX1-208ENST00000559844 TIMP3P35625 211 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 RAB1AP62820 205 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 MALLQ13021 153 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 ARFRP1Q13795 201 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 C4orf46Q504U0 113 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR2A2Q6IF42 318 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR52W1Q6IF63 320 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 ASCL4Q6XD76 172 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 MOB3CQ70IA8 216 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 C9orf62Q8N4C0 152 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 ZDHHC22Q8N966 263 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR1K1Q8NGR3 316 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR10K1Q8NGX5 313 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OPA3Q9H6K4 179 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 C12orf49Q9H741 205 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 HSPB11Q9Y547 144 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 RSU1Q15404 277 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 NKPD1Q17RQ9 610 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 LAMTOR1Q6IAA8 161 aa15.35■□□□□ 0.05
SNX1-208ENST00000559844 OR52B4Q8NGK2 314 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms