RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 LANCL1O43813 399 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 HLA-DQB1P01920 261 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 AGAP20933 346 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 TUBG1P23258 451 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 PITPNBP48739 271 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 TAS2R20P59543 309 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 SRSF1Q07955 248 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 ZNF154Q13106 437 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 DAZAP2Q15038 168 aaPredicted RBP14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 TMEM69Q5SWH9 247 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 PRAMEF6Q5VXH4 476 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 C16orf87Q6PH81 154 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 LILRB1Q8NHL6 650 aaPredicted RBP14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 LRRC46Q96FV0 321 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 CMTM3Q96MX0 182 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 OR51I2Q9H344 312 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 TUBG2Q9NRH3 451 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 MTCH1Q9NZJ7 389 aa14.73□□□□□ -0.05
CHRNA3-206ENST00000559658 CSF3P09919 207 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 OR4A8P0C604 315 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 MGMTP16455 207 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 BCL3P20749 454 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RPS23P62266 143 aaKnown RBP14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 GNG3P63215 75 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 DGCR2P98153 550 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 PIGYQ3MUY2 71 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 STEAP3Q658P3 488 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 ASCL4Q6XD76 172 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 SSX8Q7RTT4 187 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 OR51F2Q8NH61 342 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RAB40AQ8WXH6 277 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 PIK3IP1Q96FE7 263 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 S100A16Q96FQ6 103 aaKnown RBP14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 HIST1H2AAQ96QV6 131 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RTL8AQ9BWD3 113 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 TMEM59Q9BXS4 323 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 NGBQ9NPG2 151 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RBFOX1Q9NWB1 397 aaKnown RBP14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 TAAR3PQ9P1P4 343 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 FBLN5Q9UBX5 448 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 MEIOCA2RUB1 952 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 OR5B21A6NL26 309 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RAB27BO00194 218 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 UPK1BO75841 260 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 HTR3BO95264 441 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 CD3EP07766 207 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 VEGFCP49767 419 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RSU1Q15404 277 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 MPPED2Q15777 294 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 C1orf174Q8IYL3 243 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 OR2Z1Q8NG97 314 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 RAB22AQ9UL26 194 aa14.72□□□□□ -0.05
CHRNA3-206ENST00000559658 SPTAN1Q13813 2472 aaKnown RBP14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 TRAV18A0A075B6X5 111 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 A0A1B0GWJ7 208 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 SOCS1O15524 211 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 GRPP07492 148 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 RAB6AP20340 208 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 SNU13P55769 128 aaKnown RBP14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 GUCA2AQ02747 115 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 PDCD1Q15116 288 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 OLFML2AQ68BL7 652 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 ZNF826PQ6ZT77 177 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 OR2W3Q7Z3T1 314 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 OR8H2Q8N162 312 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 ZCCHC24Q8N2G6 241 aaKnown RBP14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 Q8N402 240 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 SCCPDHQ8NBX0 429 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 SELENOIQ9C0D9 397 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 ZNF442Q9H7R0 627 aa14.71□□□□□ -0.05
CHRNA3-206ENST00000559658 A0A1W2PQ09 198 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 XRCC3O43542 346 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 SPRY3O43610 288 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 UBBP0CG47 229 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 IL7P13232 177 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 GMFBP60983 142 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 RPS27AP62979 156 aaKnown RBP14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 BEX5Q5H9J7 111 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 FAM76BQ5HYJ3 339 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 PLAC9Q5JTB6 97 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 LYSMD2Q8IV50 215 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 C11orf53Q8IXP5 236 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 KCNG3Q8TAE7 436 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 PTX4Q96A99 478 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 S100A13Q99584 98 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 MICU1Q9BPX6 476 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 METTL9Q9H1A3 318 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 RNF115Q9Y4L5 304 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 LRRK2Q5S007 2527 aa14.7□□□□□ -0.06
CHRNA3-206ENST00000559658 A0A1W2PPR1 153 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 CDIPTO14735 213 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 CD3GP09693 182 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 FBXL14Q8N1E6 418 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 PXT1Q8NFP0 134 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 OR13G1Q8NGZ3 307 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 AQP3Q92482 292 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 TRIM63Q969Q1 353 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 CPNE2Q96FN4 548 aaPredicted RBP14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 CST11Q9H112 138 aa14.69□□□□□ -0.06
CHRNA3-206ENST00000559658 PLK3Q9H4B4 646 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms