RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 ENTPD6O75354 484 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 CD1AP06126 327 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 FAM157CP0CG43 387 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ANPEPP15144 967 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ACKR3P25106 362 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 CD200P41217 278 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 CSNK2BP67870 215 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 SCGB2A2Q13296 93 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 OR8B8Q15620 311 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 FBLN7Q53RD9 439 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 DCAF12L2Q5VW00 463 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 LYPD2Q6UXB3 125 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ZBTB49Q6ZSB9 765 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ZNF679Q8IYX0 411 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PQLC1Q8N2U9 271 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 SPICQ8N5J4 248 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 YIPF7Q8N8F6 280 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 OR51E1Q8TCB6 317 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 MBOAT4Q96T53 435 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 C9orf16Q9BUW7 83 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PBOV1Q9GZY1 135 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 FN3KRPQ9HA64 309 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 TMEM165Q9HC07 324 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 FAM206AQ9NX38 181 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 PPIAL4AQ9Y536 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 GMPPBQ9Y5P6 360 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 TMEM14AQ9Y6G1 99 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ATRQ13535 2644 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 A0A1W2PQL4 384 aaPredicted RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 AVPP01185 164 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 IFNA2P01563 188 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PRDX4Q13162 271 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 CEP78Q5JTW2 689 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 LPCAT4Q643R3 524 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 WDR86Q86TI4 376 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 LRRC28Q86X40 367 aaPredicted RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 C10orf67Q8IYJ2 551 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 C1orf87Q8N0U7 546 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 OR8J1Q8NGP2 316 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 GLMPQ8WWB7 406 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 ASB17Q8WXJ9 295 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 MDFIQ99750 246 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 TMEM246Q9BRR3 403 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 SLC22A4Q9H015 551 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 PATZ1Q9HBE1 687 aaKnown RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 GPR84Q9NQS5 396 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 MMP26Q9NRE1 261 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 CLN6Q9NWW5 311 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 SMPD3Q9NY59 655 aaPredicted RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 USE1Q9NZ43 259 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 RNF7Q9UBF6 113 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 MRM2Q9UI43 246 aaKnown RBP8.08□□□□□ -1.12
SPG11-214ENST00000558989 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
SPG11-214ENST00000558989 LOC110117498-PIK3R3F6TDL0 507 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 P2RY10O00398 339 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 IL1AP01583 271 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 HTR1FP30939 366 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 PRRX1P54821 245 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 ELF3P78545 371 aaPredicted RBP8.07□□□□□ -1.12
SPG11-214ENST00000558989 ZNF829Q3KNS6 432 aaPredicted RBP8.07□□□□□ -1.12
SPG11-214ENST00000558989 TP53I3Q53FA7 332 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 ESCO2Q56NI9 601 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 RHOUQ7L0Q8 258 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 BATF2Q8N1L9 274 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 MUC20Q8N307 709 aaPredicted RBP8.07□□□□□ -1.12
SPG11-214ENST00000558989 LRRC29Q8WV35 223 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 RPL3LQ92901 407 aaKnown RBP8.07□□□□□ -1.12
SPG11-214ENST00000558989 SLAMF9Q96A28 289 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 SEH1LQ96EE3 360 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 RNFT2Q96EX2 444 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 C5orf30Q96GV9 206 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 SLC25A32Q9H2D1 315 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 C7orf69Q9H7B7 122 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 AMBNQ9NP70 447 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 WARS2Q9UGM6 360 aaKnown RBP8.07□□□□□ -1.12
SPG11-214ENST00000558989 GNG8Q9UK08 70 aa8.07□□□□□ -1.12
SPG11-214ENST00000558989 A0A0G2JMP0 313 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 A0A0X1KG70 313 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 VGLL3A8MV65 326 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 TRAPPC2LH3BP13 241 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 CDIPTO14735 213 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 GYPAP02724 150 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 TFF1P04155 84 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 FAHP16930 419 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 MYF6P23409 242 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 CFL1P23528 166 aaKnown RBP8.06□□□□□ -1.12
SPG11-214ENST00000558989 THBS2P35442 1172 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 DDOSTP39656 456 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 GATA4P43694 442 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 RCN1Q15293 331 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 TMEM155Q4W5P6 130 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 BCL2L15Q5TBC7 163 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 MOB3CQ70IA8 216 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 KLBQ86Z14 1044 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 CSNK2A3Q8NEV1 391 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 OR1M1Q8NGA1 313 aa8.06□□□□□ -1.12
SPG11-214ENST00000558989 OR4M2Q8NGB6 313 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms