RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 ATPAF1Q5TC12 328 aaPredicted RBP12.63□□□□□ -0.39
RPL28-207ENST00000558815 ACP7Q6ZNF0 438 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 ANGPTL5Q86XS5 388 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 ACBD7Q8N6N7 88 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 POC1AQ8NBT0 407 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 ZNRF1Q8ND25 227 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 LGALS12Q96DT0 336 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 C1orf147Q96MC9 270 aaPredicted RBP12.63□□□□□ -0.39
RPL28-207ENST00000558815 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 SIRT7Q9NRC8 400 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 FAM118AQ9NWS6 357 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 POLDIP2Q9Y2S7 368 aa12.63□□□□□ -0.39
RPL28-207ENST00000558815 IGKV1D-17A0A075B6S4 117 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 SIGLEC5O15389 551 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 GATBO75879 557 aaKnown RBP12.62□□□□□ -0.39
RPL28-207ENST00000558815 NXPH2O95156 264 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 HTR1AP08908 422 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 ACAA1P09110 424 aaPredicted RBP12.62□□□□□ -0.39
RPL28-207ENST00000558815 GABRB1P18505 474 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 DLX1P56177 255 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 ISL1P61371 349 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 PDCD1Q15116 288 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 SMIM21Q3B7S5 101 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 SLC25A30Q5SVS4 291 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 Q6ZSR3 168 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 C9orf139Q6ZV77 190 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 LHFPL3Q86UP9 236 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 ZNF555Q8NEP9 628 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 OR2G2Q8NGZ5 317 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 C4orf36Q96KX1 117 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 Q96MT0 163 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 ALG8Q9BVK2 526 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 EXOGQ9Y2C4 368 aaKnown RBP12.62□□□□□ -0.39
RPL28-207ENST00000558815 PCDHGB1Q9Y5G3 927 aa12.62□□□□□ -0.39
RPL28-207ENST00000558815 IGHV1-69DA0A0B4J2H0 117 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 A0A1W2PRD5 423 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 A0A1W2PRF3 423 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 A0A1W2PRM7 423 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 J3QRE1 110 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 GPR37O15354 613 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
RPL28-207ENST00000558815 MPZL2O60487 215 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 PGA5P0DJD9 388 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 NANOS3P60323 173 aaKnown RBP12.61□□□□□ -0.39
RPL28-207ENST00000558815 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 UBE2V2Q15819 145 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 C11orf91Q3C1V1 193 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
RPL28-207ENST00000558815 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 MRPL48Q96GC5 212 aaKnown RBP12.61□□□□□ -0.39
RPL28-207ENST00000558815 SMPD3Q9NY59 655 aaPredicted RBP12.61□□□□□ -0.39
RPL28-207ENST00000558815 RASL12Q9NYN1 266 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 ZNF222Q9UK12 451 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 MYRFQ9Y2G1 1151 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 MAB21L2Q9Y586 359 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 KPTNQ9Y664 436 aa12.61□□□□□ -0.39
RPL28-207ENST00000558815 STAB1Q9NY15 2570 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 SERPINA3P01011 423 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 ZNF20P17024 532 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 ACTA2P62736 377 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 ACTG2P63267 376 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 KLRD1Q13241 179 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
RPL28-207ENST00000558815 TMEM244Q5VVB8 128 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 LPCAT4Q643R3 524 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 KCTD20Q7Z5Y7 419 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 CCDC54Q8NEL0 328 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 RHOXF1Q8NHV9 184 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 TAF15Q92804 592 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPL28-207ENST00000558815 FGGYQ96C11 551 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 ADAT3Q96EY9 351 aaPredicted RBP12.6□□□□□ -0.39
RPL28-207ENST00000558815 PELI1Q96FA3 418 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 CHST5Q9GZS9 411 aa12.6□□□□□ -0.39
RPL28-207ENST00000558815 ZMAT3Q9HA38 289 aaKnown RBP12.6□□□□□ -0.39
RPL28-207ENST00000558815 IGKV1-27A0A075B6S5 117 aa12.59□□□□□ -0.39
RPL28-207ENST00000558815 ANKRD65E5RJM6 399 aa12.59□□□□□ -0.39
RPL28-207ENST00000558815 SLC1A7O00341 560 aa12.59□□□□□ -0.39
RPL28-207ENST00000558815 CLIC3O95833 236 aa12.59□□□□□ -0.39
RPL28-207ENST00000558815 FADS2O95864 444 aaKnown RBP12.59□□□□□ -0.39
RPL28-207ENST00000558815 RNASE1P07998 156 aaKnown RBP12.59□□□□□ -0.39
RPL28-207ENST00000558815 OCM2P0CE71 109 aa12.59□□□□□ -0.39
RPL28-207ENST00000558815 OCMP0CE72 109 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms