RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 CYB561P49447 251 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 RSU1Q15404 277 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 FAM209BQ5JX69 171 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ACER2Q5QJU3 275 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 YRDCQ86U90 279 aaKnown RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 BVESQ8NE79 360 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 OR1S1Q8NH92 325 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 STOML3Q8TAV4 291 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 MRPS24Q96EL2 167 aaKnown RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ADGRG7Q96K78 797 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 Q96M66 194 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 GUCD1Q96NT3 240 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 FOXB1Q99853 325 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ZNF471Q9BX82 626 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 C5orf66Q9H5L9 145 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 PLEKHJ1Q9NW61 149 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 B4GALT7Q9UBV7 327 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 HSF4Q9ULV5 492 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 COL27A1Q8IZC6 1860 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 CCDC187A0A096LP49 1063 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 A0A1W2PP11 408 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 A0A1W2PPH5 198 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 EEF1E1-BLOC1S5C9J1V9 151 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 E9PLN8 166 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 CXCL13O43927 109 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 TRAPPC6AO75865 159 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 RLN2P04090 185 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 TMEM225BP0DP42 221 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 TPT1P13693 172 aaKnown RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 PGAM2P15259 253 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ZNF250P15622 560 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 AVPR2P30518 371 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 SERPINF1P36955 418 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 HTR5AP47898 357 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 RBP2P50120 134 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 NPY4RP50391 375 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 LUMP51884 338 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 MTCP1P56278 107 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 EIF5AP63241 154 aaKnown RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 NAAAQ02083 359 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 RSPO1Q2MKA7 263 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 SNAI3Q3KNW1 292 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 LRRC37A5PQ49AS3 106 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 DBX2Q6ZNG2 339 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 RNF144BQ7Z419 303 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 GALNT11Q8NCW6 608 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 OR13G1Q8NGZ3 307 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 OR10D3Q8NH80 312 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 NPRL2Q8WTW4 380 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 PIGTQ969N2 578 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 SGK3Q96BR1 496 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 BORCS8Q96FH0 119 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 SEC22AQ96IW7 307 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ST6GALNAC5Q9BVH7 336 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 LINC00470Q9BZP3 86 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 FN3KRPQ9HA64 309 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 CRLF2Q9HC73 371 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 ZNF701Q9NV72 531 aaPredicted RBP6.34□□□□□ -1.39
VPS13C-206ENST00000558338 C1orf123Q9NWV4 160 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 IL36GQ9NZH8 169 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 MBD2Q9UBB5 411 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 SLC7A11Q9UPY5 501 aa6.34□□□□□ -1.39
VPS13C-206ENST00000558338 TEX13DA0A0J9YY54 714 aaPredicted RBP6.33□□□□□ -1.4
VPS13C-206ENST00000558338 C13orf42A0A1B0GVH6 325 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 C21orf140B9A014 251 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 F5H0A9 414 aaPredicted RBP6.33□□□□□ -1.4
VPS13C-206ENST00000558338 LCATP04180 440 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 DBHP09172 617 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 LYL1P12980 280 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 ZNF32P17041 273 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 Q0VFX4 171 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 SNTB1Q13884 538 aaKnown RBP6.33□□□□□ -1.4
VPS13C-206ENST00000558338 PAN3Q58A45 887 aaKnown RBP6.33□□□□□ -1.4
VPS13C-206ENST00000558338 TMEM42Q69YG0 159 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 ZNF774Q6NX45 483 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 PRSS54Q6PEW0 395 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 CRIP3Q6Q6R5 217 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 UQCC3Q6UW78 93 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 CLEC18BQ6UXF7 455 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 ASCL4Q6XD76 172 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 MOB3CQ70IA8 216 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 RAB11FIP2Q7L804 512 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 OR10K1Q8NGX5 313 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 NANOS1Q8WY41 292 aaKnown RBP6.33□□□□□ -1.4
VPS13C-206ENST00000558338 TMEM230Q96A57 120 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 C2orf50Q96LR7 162 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 FAM173AQ9BQD7 235 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 GPR87Q9BY21 358 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 OR2H1Q9GZK4 316 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 GPR35Q9HC97 309 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 GPR173Q9NS66 373 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 FAM86C1Q9NVL1 165 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 P4HTMQ9NXG6 502 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 DNAJB11Q9UBS4 358 aa6.33□□□□□ -1.4
VPS13C-206ENST00000558338 CSAG2Q9Y5P2 127 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms