RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PRRX2Q99811 253 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 SLIRPQ9GZT3 109 aaKnown RBP12.52□□□□□ -0.41
SPG11-210ENST00000558319 CLEC1BQ9P126 229 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 MMP17Q9ULZ9 603 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 PPP1R1AQ13522 171 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 OSR2Q8N2R0 312 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 ARIH2OSQ8N7S6 290 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 RNF2Q99496 336 aa12.52□□□□□ -0.41
SPG11-210ENST00000558319 FAM24AA6NFZ4 105 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 CST4P01036 141 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
SPG11-210ENST00000558319 AWAT1Q58HT5 328 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 ZDHHC23Q8IYP9 409 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 RGP1Q92546 391 aaPredicted RBP12.51□□□□□ -0.41
SPG11-210ENST00000558319 ABHD14AQ9BUJ0 271 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 TMEM140Q9NV12 185 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 SELENOPP49908 381 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 OR1C1Q15619 314 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 TGIF2LYQ8IUE0 185 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 KCNE3Q9Y6H6 103 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 UBR2Q8IWV8 1755 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 RGS13O14921 159 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 PPM1DO15297 605 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 CELA2BP08218 269 aaPredicted RBP12.51□□□□□ -0.41
SPG11-210ENST00000558319 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 CLN3Q13286 438 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 CD96P40200 585 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 OR3A4PP47883 348 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 OR2M3Q8NG83 312 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 CRYGNQ8WXF5 182 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 IER2Q9BTL4 223 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 DHRS4L2Q6PKH6 230 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 TOX2Q96NM4 488 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 EVPLQ92817 2033 aa12.51□□□□□ -0.41
SPG11-210ENST00000558319 TMEM272A0A1B0GTI8 110 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 CYR61O00622 381 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 WFDC3Q8IUB2 231 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 OR10C1Q96KK4 312 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 GPX7Q96SL4 187 aaPredicted RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 POLDIP2Q9Y2S7 368 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 ZNF250P15622 560 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 KCNE4Q8WWG9 221 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 S1PR5Q9H228 398 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 ICAM5Q9UMF0 924 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 ABLIM3O94929 683 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 PRSS1P07477 247 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 DUSP8Q13202 625 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 EAF1Q96JC9 268 aaPredicted RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 KLF13Q9Y2Y9 288 aaPredicted RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 VN1R17PQ8TDU5 208 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 LIPGQ9Y5X9 500 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 AGFG2O95081 481 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 CA6P23280 308 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 CD40P25942 277 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 EMC4Q5J8M3 183 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
SPG11-210ENST00000558319 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
SPG11-210ENST00000558319 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 LAMB4A4D0S4 1761 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 NDUFB6O95139 128 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 HPP00738 406 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 IGF2P01344 180 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 SPCS3P61009 180 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 RHOBP62745 196 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 CLDN23Q96B33 292 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 GALMQ96C23 342 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 SLC25A19Q9HC21 320 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 ADPRHL1Q8NDY3 354 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 OR1L6Q8NGR2 347 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 FGF20Q9NP95 211 aaPredicted RBP12.49□□□□□ -0.41
SPG11-210ENST00000558319 OPRK1P41145 380 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 RPS4XP62701 263 aaKnown RBP12.49□□□□□ -0.41
SPG11-210ENST00000558319 DHRS2Q13268 280 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 FBXL14Q8N1E6 418 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 KCNK15Q9H427 330 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 TRAV1-2A0A0B4J238 106 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 CRISP2P16562 243 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 ARR3P36575 388 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 FMODQ06828 376 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 MRGPREQ86SM8 312 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 BAHD1Q8TBE0 780 aaPredicted RBP12.49□□□□□ -0.41
SPG11-210ENST00000558319 FAAP24Q9BTP7 215 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms