RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SIGLEC5O15389 551 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 SYNGR1O43759 233 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 NOS1APO75052 506 aaPredicted RBP7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 RNASE1P07998 156 aaKnown RBP7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 HKR1P10072 659 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 GABRB1P18505 474 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 ATP6V1E1P36543 226 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 PDCD1Q15116 288 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 ODF4Q2M2E3 257 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 CDONQ4KMG0 1287 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 LRRC10Q5BKY1 277 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 METTL11BQ5VVY1 283 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 PRSS35Q8N3Z0 413 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 C8orf46Q8TAG6 207 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 LHX4Q969G2 390 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 MED30Q96HR3 178 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 DMRTB1Q96MA1 342 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 ZNF488Q96MN9 340 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 DCTN5Q9BTE1 182 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 ZMAT3Q9HA38 289 aaKnown RBP7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 RASL12Q9NYN1 266 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 MAB21L2Q9Y586 359 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 KPTNQ9Y664 436 aa7.23□□□□□ -1.25
SNRPA1-206ENST00000558059 IGHV1-69DA0A0B4J2H0 117 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 A0A1B0GVI7 797 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 NKX6-3A6NJ46 265 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 H3BSH0 61 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 J3QT63 122 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 SYT7O43581 403 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 IGHV1-69P01742 117 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 PGA5P0DJD9 388 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 MPZP25189 248 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 KIR3DL2P43630 455 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 HAAOP46952 286 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 GABRA2P47869 451 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 CAV3P56539 151 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 IL13RA1P78552 427 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 UBE2V2Q15819 145 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 TP53I3Q53FA7 332 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 AWAT1Q58HT5 328 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 MEDAGQ5VYS4 303 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 Q6YL49 198 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 ACP7Q6ZNF0 438 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 VMO1Q7Z5L0 202 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 ZNF573Q86YE8 665 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 CALHM1Q8IU99 346 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 RDH10Q8IZV5 341 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 PQLC1Q8N2U9 271 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 Q8N7P7 452 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 POC1AQ8NBT0 407 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 ZNRF1Q8ND25 227 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 RHOXF1Q8NHV9 184 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 GATAD2BQ8WXI9 593 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 SLC25A28Q96A46 364 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 TMIGD2Q96BF3 282 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 RNFT2Q96EX2 444 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 SDSLQ96GA7 329 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 C9orf16Q9BUW7 83 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 NOX4Q9NPH5 578 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 ACOXLQ9NUZ1 547 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 ONECUT1Q9UBC0 465 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 SLC25A10Q9UBX3 287 aaPredicted RBP7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 EXOGQ9Y2C4 368 aaKnown RBP7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 WNK1Q9H4A3 2382 aa7.22□□□□□ -1.25
SNRPA1-206ENST00000558059 IGKV1-27A0A075B6S5 117 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 DAPL1A0PJW8 107 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ANKRD61A6NGH8 418 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 RFPL4AA6NLU0 287 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 RFPL4AL1F8VTS6 287 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 SLC16A6O15403 523 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 HOXA3O43365 443 aaPredicted RBP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 NDUFB7P17568 137 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 DLX1P56177 255 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 OR12D2P58182 307 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 NANOS3P60323 173 aaKnown RBP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ERVK11-1P61568 191 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 PRB3Q04118 309 aaPredicted RBP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 FDX2Q6P4F2 183 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 C16orf87Q6PH81 154 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 METAP1DQ6UB28 335 aaPredicted RBP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ZBTB49Q6ZSB9 765 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 C1orf122Q6ZSJ8 110 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 KCTD20Q7Z5Y7 419 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ANGPTL5Q86XS5 388 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 PDZD9Q8IXQ8 264 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ENTHD1Q8IYW4 607 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ACBD7Q8N6N7 88 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 CD177Q8N6Q3 437 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 KIR3DL3Q8N743 410 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 C3orf56Q8N813 242 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 CCDC54Q8NEL0 328 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 OR2G2Q8NGZ5 317 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 H1FXQ92522 213 aaKnown RBP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 TAF15Q92804 592 aaKnown RBP eCLIP7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 TNFRSF14Q92956 283 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 LGALS12Q96DT0 336 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 NRIP2Q9BQI9 281 aa7.21□□□□□ -1.26
SNRPA1-206ENST00000558059 ADI1Q9BV57 179 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms