RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 EPHA1P21709 976 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 EEF1B2P24534 225 aaKnown RBP7.55□□□□□ -1.2
CHD8-214ENST00000557727 SOX2P48431 317 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 LMO4P61968 165 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 RPS25P62851 125 aaKnown RBP7.55□□□□□ -1.2
CHD8-214ENST00000557727 GNG3P63215 75 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 LOXL1Q08397 574 aaPredicted RBP7.55□□□□□ -1.2
CHD8-214ENST00000557727 HFEQ30201 348 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 Q499Y3 187 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 AVPI1Q5T686 147 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 LIPKQ5VXJ0 399 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 PLCXD3Q63HM9 321 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 ZNF367Q7RTV3 350 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 DNAAF1Q8NEP3 725 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 AQP3Q92482 292 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 TMEM106AQ96A25 262 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 SEH1LQ96EE3 360 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 C1orf159Q96HA4 380 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 OR14A2Q96R54 314 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 MICU1Q9BPX6 476 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 PIMREGQ9BSJ6 248 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 PLEKHA1Q9HB21 404 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 TMEM165Q9HC07 324 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 C14orf119Q9NWQ9 140 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 C1orf123Q9NWV4 160 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 NPTNQ9Y639 398 aa7.55□□□□□ -1.2
CHD8-214ENST00000557727 MXRA5Q9NR99 2828 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 ZNF879B4DU55 563 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 CLDN25C9JDP6 229 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 F5H0A9 414 aaPredicted RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 F8VVB4 439 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 F8VWA3 439 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 IFNL4K9M1U5 179 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 CDIPTO14735 213 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 PPIHO43447 177 aaKnown RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 GATBO75879 557 aaKnown RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 ZNF205O95201 554 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 TNFAIP8O95379 198 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 RPSAP08865 295 aaKnown RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 OCM2P0CE71 109 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 ATF1P18846 271 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 AMY2BP19961 511 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 AZGP1P25311 298 aaKnown RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 GPR6P46095 362 aaPredicted RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 ZP1P60852 638 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 ERVK11-1P61568 191 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 BTG1P62324 171 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 CARTPTQ16568 116 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 FAM27D1Q5T7N8 215 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 SYT6Q5T7P8 510 aaPredicted RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 TEX36Q5VZQ5 186 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 CD200R1LQ6Q8B3 271 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 LRRC28Q86X40 367 aaPredicted RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 ANGPTL5Q86XS5 388 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 C19orf18Q8NEA5 215 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 OR13C9Q8NGT0 318 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 CLDND2Q8NHS1 167 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 TRMT10AQ8TBZ6 339 aaKnown RBP7.54□□□□□ -1.2
CHD8-214ENST00000557727 NPRL2Q8WTW4 380 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 TECTBQ96PL2 329 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 FN3KRPQ9HA64 309 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 NDUFB11Q9NX14 153 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 TAS2R4Q9NYW5 299 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 RNF7Q9UBF6 113 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 DHDHQ9UQ10 334 aa7.54□□□□□ -1.2
CHD8-214ENST00000557727 HIVEP2P31629 2446 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 IGKV1-12A0A0C4DH73 117 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 FAM157AC9JC47 383 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 J3QT63 122 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 SULT1B1O43704 296 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 NOS1APO75052 506 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 IGKV1D-12P01611 117 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 IGHV2-5P01817 119 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 HSMCR30P0CW71 290 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 PGA5P0DJD9 388 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 CD37P11049 281 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ZNF20P17024 532 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ADRA2CP18825 462 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 USF1P22415 310 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 CD80P33681 288 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 TGFBR2P37173 567 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 HAAOP46952 286 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 FUT6P51993 359 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 FABP5Q01469 135 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 MZT1Q08AG7 82 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 IL24Q13007 206 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ZNF404Q494X3 552 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 TMEM155Q4W5P6 130 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 ARMCX4Q5H9R4 360 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 HAGHLQ6PII5 290 aaPredicted RBP7.53□□□□□ -1.2
CHD8-214ENST00000557727 SERPINA12Q8IW75 414 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 OR52N4Q8NGI2 321 aa7.53□□□□□ -1.2
CHD8-214ENST00000557727 OR10Z1Q8NGY1 313 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms