RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 FGL1Q08830 312 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 GK2Q14410 553 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 SYPL1Q16563 259 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 TAF9Q16594 264 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 TMEM176BQ3YBM2 270 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 ACSM3Q53FZ2 586 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CLVS2Q5SYC1 327 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 KPRPQ5T749 579 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 FAM180BQ6P0A1 224 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 PGAP1Q75T13 922 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 SHFQ7M4L6 423 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CEACAM19Q7Z692 300 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 TMEM17Q86X19 198 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CPOQ8IVL8 374 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CDH26Q8IXH8 852 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 C1orf162Q8NEQ5 155 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 OR52L1Q8NGH7 329 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 OR9A2Q8NGT5 310 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 OR4F5Q8NH21 305 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 FAM110DQ8TAY7 271 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 RPS4Y2Q8TD47 263 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 THEM6Q8WUY1 208 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 RAB8BQ92930 207 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CNRIP1Q96F85 164 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 PHYHIPLQ96FC7 376 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 PGLYRP3Q96LB9 341 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 ZNF681Q96N22 645 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 AMDHD1Q96NU7 426 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 ALX4Q9H161 411 aaPredicted RBP5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 Q9N2J8 555 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 SLC17A5Q9NRA2 495 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CMC2Q9NRP2 79 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 TAS2R8Q9NYW2 309 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 CHST2Q9Y4C5 530 aa5.79□□□□□ -1.48
SPTLC2-206ENST00000557566 ARHGAP32A7KAX9 2087 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 IGHV1-18A0A0C4DH31 117 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 A0A0D9SG52 128 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 RAB19A4D1S5 217 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CDHR4A6H8M9 788 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 UNC119BA6NIH7 251 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ZNF98A6NK75 572 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 DUXAA6NLW8 204 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 PRR23D1E9PI22 279 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 DNASE2O00115 360 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 BHLHE40O14503 412 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 PPIHO43447 177 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 GMDSO60547 372 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 KHDRBS3O75525 346 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ALDOBP05062 364 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CHRM4P08173 479 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CD3GP09693 182 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 IFI6P09912 130 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SBK2P0C263 348 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 PRR23D2P0DMB1 279 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 MGMTP16455 207 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SRP9P49458 86 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CCR6P51684 374 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 TMEM33P57088 247 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 FUT5Q11128 374 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 FOXF1Q12946 379 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SLC9A3R2Q15599 337 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 RUSC1-AS1Q66K80 236 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 KRTAP5-3Q6L8H2 238 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 RPL22L1Q6P5R6 122 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 GSG1LQ6UXU4 331 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 APOOLQ6UXV4 268 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CFAP77Q6ZQR2 320 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 TMPRSS11FQ6ZWK6 438 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 TMUB2Q71RG4 321 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 LINGO2Q7L985 606 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 COMTD1Q86VU5 262 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SAMD14Q8IZD0 417 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 POMGNT2Q8NAT1 580 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 DNAAF1Q8NEP3 725 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 NUP37Q8NFH4 326 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 OR51G2Q8NGK0 314 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 OR1S1Q8NH92 325 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 XAGE5Q8WWM1 108 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 FCAMRQ8WWV6 532 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 GTF3AQ92664 365 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 RDH5Q92781 318 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 MARC2Q969Z3 335 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 FOXRED1Q96CU9 486 aaPredicted RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 RAB39BQ96DA2 213 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 WWC2-AS2Q96NR7 200 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 BBS4Q96RK4 519 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 WFDC6Q9BQY6 131 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 UQCC2Q9BRT2 126 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SLC19A3Q9BZV2 496 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SLC38A1Q9H2H9 487 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ZNF442Q9H7R0 627 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ZNF665Q9H7R5 613 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 CNTD2Q9H8S5 307 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ISG20L2Q9H9L3 353 aaKnown RBP5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SCPEP1Q9HB40 452 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 NRIP3Q9NQ35 241 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 SLC35C2Q9NQQ7 365 aa5.78□□□□□ -1.48
SPTLC2-206ENST00000557566 ZCCHC3Q9NUD5 404 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms