RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PRSS35Q8N3Z0 413 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 PNLDC1Q8NA58 520 aaKnown RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 TRMT10AQ8TBZ6 339 aaKnown RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 NPRL2Q8WTW4 380 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 APH1BQ8WW43 257 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 RAB40AQ8WXH6 277 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 ST8SIA4Q92187 359 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 MYDGFQ969H8 173 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 PELI1Q96FA3 418 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 JAM3Q9BX67 310 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 DNTTIP1Q9H147 329 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 TLNRD1Q9H1K6 362 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 OR51I2Q9H344 312 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 METTL17Q9H7H0 456 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 RASL12Q9NYN1 266 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 CNOT2Q9NZN8 540 aaKnown RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 DIMT1Q9UNQ2 313 aaKnown RBP6.96□□□□□ -1.3
PSEN1-223ENST00000557511 DHDHQ9UQ10 334 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 ERGIC3Q9Y282 383 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 PCDHGB5Q9Y5G0 923 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 MTORP42345 2549 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 CR1P17927 2039 aa6.96□□□□□ -1.3
PSEN1-223ENST00000557511 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 IGHV3OR15-7A0A075B7D8 119 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 A6NIN4 97 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 AKR7A2O43488 359 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 FBXO24O75426 580 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 NXPH2O95156 264 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 LHBP01229 141 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 LIPFP07098 398 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-223ENST00000557511 KIR3DL2P43630 455 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 GABRA2P47869 451 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 TGM4P49221 684 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 RBP2P50120 134 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 CAPZA1P52907 286 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 IL13RA1P78552 427 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 ST3GAL4Q11206 333 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 TMEM42Q69YG0 159 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 RBMS3Q6XE24 437 aaKnown RBP6.95□□□□□ -1.3
PSEN1-223ENST00000557511 Q6ZSR3 168 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 LHFPL2Q6ZUX7 228 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 WDR86Q86TI4 376 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 FAM90A1Q86YD7 464 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 MKXQ8IYA7 352 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 CMTM4Q8IZR5 234 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 DNAAF1Q8NEP3 725 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 OR5D14Q8NGL3 314 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 GPR148Q8TDV2 347 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 ZNF418Q8TF45 676 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-223ENST00000557511 HPSE2Q8WWQ2 592 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 AQP3Q92482 292 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 TFAP2CQ92754 450 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 FGGYQ96C11 551 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 CCL13Q99616 98 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 NUDT16L1Q9BRJ7 211 aaKnown RBP6.95□□□□□ -1.3
PSEN1-223ENST00000557511 PKIBQ9C010 78 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 CHST5Q9GZS9 411 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 Q9H521 79 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 PPP1R3EQ9H7J1 279 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 SNTG1Q9NSN8 517 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 BABAM2Q9NXR7 383 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 KAAG1Q9UBP8 84 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 GLS2Q9UI32 602 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 POLR3KQ9Y2Y1 108 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-223ENST00000557511 TPRKBQ9Y3C4 175 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 INSIG2Q9Y5U4 225 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 DYSFO75923 2080 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
PSEN1-223ENST00000557511 IGHV2-70DA0A0C4DH43 119 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 A0A1W2PPH5 198 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 PQLC2LA1A4F0 135 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 OR2AT4A6NND4 320 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 TRAPPC2LH3BP13 241 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 SLC1A7O00341 560 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 DVL1O14640 695 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 PLATP00750 562 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 HCKP08631 526 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 NDUFB7P17568 137 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 EGR1P18146 543 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 ATF1P18846 271 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 AZGP1P25311 298 aaKnown RBP6.94□□□□□ -1.3
PSEN1-223ENST00000557511 ZFP36P26651 326 aaKnown RBP6.94□□□□□ -1.3
PSEN1-223ENST00000557511 POU3F4P49335 361 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 ETV1P50549 477 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 AQP4P55087 323 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 MTCP1P56278 107 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 SEC61A1P61619 476 aaKnown RBP6.94□□□□□ -1.3
PSEN1-223ENST00000557511 PPP3R1P63098 170 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 HNRNPA0Q13151 305 aaKnown RBP6.94□□□□□ -1.3
PSEN1-223ENST00000557511 IKZF1Q13422 519 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 KRTAP21-3Q3LHN1 58 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 DMRTC1Q5HYR2 192 aa6.94□□□□□ -1.3
PSEN1-223ENST00000557511 METTL11BQ5VVY1 283 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms