RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ANGPTL7O43827 346 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 SEC22BO75396 215 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 UBL3O95164 117 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 HSPA4LO95757 839 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 OTCP00480 354 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 OPN1SWP03999 348 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 GSTA1P08263 222 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 FBP1P09467 338 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 WNT2P09544 360 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 NQO1P15559 274 aaKnown RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 NCF2P19878 526 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 BCL3P20749 454 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 FKBP2P26885 142 aaKnown RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 CRABP2P29373 138 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 HTR5AP47898 357 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 PITPNBP48739 271 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 POLR2HP52434 150 aaKnown RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 UCP2P55851 309 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 HSF2Q03933 536 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF763Q0D2J5 394 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZMYND11Q15326 602 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 CHI3L2Q15782 390 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 GPAT3Q53EU6 434 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF770Q6IQ21 691 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 TMEM53Q6P2H8 277 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 C16orf62Q7Z3J2 963 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 VRK2Q86Y07 508 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 NDUFA11Q86Y39 141 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF584Q8IVC4 421 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 CCDC36Q8IYA8 594 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 LRRC18Q8N456 261 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 C10orf53Q8N6V4 93 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZIC4Q8N9L1 334 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 OR5D16Q8NGK9 328 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 OR5AK3PQ8NH89 298 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 CLHC1Q8NHS4 586 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF420Q8TAQ5 688 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 MAGEE2Q8TD90 523 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 PYROXD1Q8WU10 500 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 UBTD2Q8WUN7 234 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 NABP1Q96AH0 204 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 PPCDCQ96CD2 204 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 BSCL2Q96G97 398 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF317Q96PQ6 595 aaPredicted RBP2.84□□□□□ -1.95
CHD8-212ENST00000557329 ARHGDIGQ99819 225 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 SH3GL3Q99963 347 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 ZNF649Q9BS31 505 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 EMC6Q9BV81 110 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 SHCBP1LQ9BZQ2 653 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 DPY30Q9C005 99 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 PIGUQ9H490 435 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 MEAF6Q9HAF1 191 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 IL1RAPQ9NPH3 570 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 MIOXQ9UGB7 285 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 VPREB3Q9UKI3 123 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 TRAPPC4Q9Y296 219 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 TIMM22Q9Y584 194 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 KCNE3Q9Y6H6 103 aa2.84□□□□□ -1.95
CHD8-212ENST00000557329 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.96
CHD8-212ENST00000557329 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 C5orf49A4QMS7 147 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 ZSCAN5BA6NJL1 495 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 ZNF879B4DU55 563 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 RNASEK-C17orf49H0YIS7 233 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 H3BUX3 64 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 DNALI1O14645 258 aaPredicted RBP2.83□□□□□ -1.96
CHD8-212ENST00000557329 FCMRO60667 390 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 SUPT7LO94864 414 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 VAMP5O95183 116 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 FARS2O95363 451 aaKnown RBP2.83□□□□□ -1.96
CHD8-212ENST00000557329 MBD3O95983 291 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 RENP00797 406 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 PTHP01270 115 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 SERPINA5P05154 406 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 KRTAP1-4P0C5Y4 121 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 PPIAL4GP0DN37 164 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 UQCRBP14927 111 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 ZNF250P15622 560 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 AHCYP23526 432 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 ACKR3P25106 362 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 PAX6P26367 422 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 LCN1P31025 176 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 CFHR2P36980 270 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 MPV17P39210 176 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 ACAA2P42765 397 aaKnown RBP2.83□□□□□ -1.96
CHD8-212ENST00000557329 MAGEA3P43357 314 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 MAGEA6P43360 314 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 KIR2DS4P43632 304 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 RPS5P46782 204 aaKnown RBP2.83□□□□□ -1.96
CHD8-212ENST00000557329 CCT3P49368 545 aaKnown RBP2.83□□□□□ -1.96
CHD8-212ENST00000557329 EFNB2P52799 333 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 COPZ1P61923 177 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 H3F3AP84243 136 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 PMS2P3Q13401 168 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 GPR50Q13585 617 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 Q1RN00 199 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 TMEM155Q4W5P6 130 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 PHYHD1Q5SRE7 291 aa2.83□□□□□ -1.96
CHD8-212ENST00000557329 FAM201AQ5SY85 155 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms