RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 SATL1Q86VE3 508 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 OR11L1Q8NGX0 322 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 THRSPQ92748 146 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 Q96MF0 132 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 CENPOQ9BU64 300 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 FUNDC2Q9BWH2 189 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 BPESC1Q9GZL8 116 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 WDR13Q9H1Z4 485 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 EXOSC4Q9NPD3 245 aaKnown RBP10.77□□□□□ -0.69
SHMT2-227ENST00000557269 MTCH1Q9NZJ7 389 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 RNF7Q9UBF6 113 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
SHMT2-227ENST00000557269 IGHV3OR15-7A0A075B7D8 119 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 LOC100506127A0A0U1RQW1 187 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 CLDN25C9JDP6 229 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 ANGPTL7O43827 346 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 FGF9P31371 208 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-227ENST00000557269 TGFBR1P36897 503 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 CFHR2P36980 270 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 OR3A4PP47883 348 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 POU3F4P49335 361 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 TMEM33P57088 247 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 PDZK1IP1Q13113 114 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 ZMYND11Q15326 602 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 SHEQ5VZ18 495 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 SFRP4Q6FHJ7 346 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-227ENST00000557269 PHYHIPQ92561 330 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 SLAMF9Q96A28 289 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 PKIBQ9C010 78 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 NAA50Q9GZZ1 169 aaKnown RBP10.76□□□□□ -0.69
SHMT2-227ENST00000557269 TCF7L1Q9HCS4 588 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 SSR3Q9UNL2 185 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 WIPI2Q9Y4P8 454 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
SHMT2-227ENST00000557269 A0A096LNT2 108 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 LRRC30A6NM36 301 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 IFNL4K9M1U5 179 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 MAGEB3O15480 346 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 ARL6IP5O75915 188 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 IGHV2-70P01814 119 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 TFF1P04155 84 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 CSF3P09919 207 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 PGA5P0DJD9 388 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 CALCBP10092 127 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 CD37P11049 281 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 IRF2P14316 349 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 ZNF93P35789 620 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-227ENST00000557269 NR4A2P43354 598 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 GPR6P46095 362 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-227ENST00000557269 NPBWR2P48146 333 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 OR10A3P58181 314 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 DSCR9P59020 149 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 ERVK11-1P61568 191 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 LSM3P62310 102 aaKnown RBP10.75□□□□□ -0.69
SHMT2-227ENST00000557269 IL24Q13007 206 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 SLC16A12Q6ZSM3 486 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 NR2C2APQ86WQ0 139 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 DEFB108BQ8NET1 73 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 OR4D6Q8NGJ1 314 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 OR10Z1Q8NGY1 313 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 ZNF671Q8TAW3 534 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 HPS1Q92902 700 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 NRIP2Q9BQI9 281 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 PIMREGQ9BSJ6 248 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 NARFLQ9H6Q4 476 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 CNTD2Q9H8S5 307 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 TMEM165Q9HC07 324 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 SNTG1Q9NSN8 517 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 SCOCQ9UIL1 159 aa10.75□□□□□ -0.69
SHMT2-227ENST00000557269 AK6Q9Y3D8 172 aaKnown RBP10.75□□□□□ -0.69
SHMT2-227ENST00000557269 PPIAL4EA0A075B759 164 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 IGHV4-61A0A0C4DH41 118 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 SMIM30A4D0T7 59 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 PPIAL4DF5H284 164 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 NDUFS8O00217 210 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 AIREO43918 545 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 NOS1APO75052 506 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-227ENST00000557269 CDRT1O95170 752 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 CLEC2LP0C7M8 214 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 PPIAL4FP0DN26 164 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 TMEM225BP0DP42 221 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 BCL3P20749 454 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 RPL5P46777 297 aaKnown RBP10.74□□□□□ -0.69
SHMT2-227ENST00000557269 BTG1P62324 171 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 GPR107Q5VW38 600 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 CIARTQ8N365 385 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-227ENST00000557269 JAGN1Q8N5M9 183 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 POC1AQ8NBT0 407 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 OR5T2Q8NGG2 359 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 OR51F2Q8NH61 342 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 TNFAIP8L1Q8WVP5 186 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 GPER1Q99527 375 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 NEK6Q9HC98 313 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 PPIAL4AQ9Y536 164 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
SHMT2-227ENST00000557269 MEGF11A6BM72 1044 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 RNF223E7ERA6 249 aa10.73□□□□□ -0.69
SHMT2-227ENST00000557269 LGALS8O00214 317 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms