RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OR2H1Q9GZK4 316 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 MMP28Q9H239 520 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 METTL17Q9H7H0 456 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 AUNIPQ9H7T9 357 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZDHHC11Q9H8X9 412 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 CALHM2Q9HA72 323 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 PCDHB16Q9NRJ7 776 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 NLKQ9UBE8 527 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 UPB1Q9UBR1 384 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ATPIF1Q9UII2 106 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 ZNF107Q9UII5 783 aaPredicted RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 RBMX2Q9Y388 322 aaKnown RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 NUBP2Q9Y5Y2 271 aa3.86□□□□□ -1.79
SRP54-212ENST00000556992 MDC1Q14676 2089 aaKnown RBP3.86□□□□□ -1.79
SRP54-212ENST00000556992 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 TMEM272A0A1B0GTI8 110 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 CIB4A0PJX0 185 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ANKRD20A5PA0PJZ0 165 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 H3BSH0 61 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 H7C417 338 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 LDLRAD4O15165 306 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 DHRS3O75911 302 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 IGLV3-1P01715 115 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 IGHG3P01860 377 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 LCATP04180 440 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 TCRBP04435 133 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 SERPINA5P05154 406 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 COX5BP10606 129 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 SLC2A1P11166 492 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 PRF1P14222 555 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 B4GALT1P15291 398 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ABOP16442 354 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ZNF32P17041 273 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 PSMB1P20618 241 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 CRYGSP22914 178 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 GIFP27352 417 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 RCVRNP35243 200 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 THBS4P35443 961 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 EIF2S3P41091 472 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 PTGFRP43088 359 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ALDH3B1P43353 468 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 SRP9P49458 86 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 EIF2B2P49770 351 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 TGFBR3Q03167 851 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 TLE1Q04724 770 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ARL6IP1Q15041 203 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 KRTAP27-1Q3LI81 207 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 CDNFQ49AH0 187 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 TSPO2Q5TGU0 170 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 FBXW9Q5XUX1 488 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ASPHD2Q6ICH7 369 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 OR2A2Q6IF42 318 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ZNF774Q6NX45 483 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 TMEM53Q6P2H8 277 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 BTN2A1Q7KYR7 527 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 NAA40Q86UY6 237 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 IZUMO1Q8IYV9 350 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 FDCSPQ8NFU4 85 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 OR52N4Q8NGI2 321 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 OR13C9Q8NGT0 318 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 OR52I2Q8NH67 350 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 OR56B4Q8NH76 319 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 FNDC9Q8TBE3 224 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 FAM46BQ96A09 425 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 SPSB1Q96BD6 273 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ADAT3Q96EY9 351 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 GMPPAQ96IJ6 420 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 FAM71F1Q96KD3 344 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 TECTBQ96PL2 329 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 S100A13Q99584 98 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 VRK1Q99986 396 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 CST11Q9H112 138 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 WNT5BQ9H1J7 359 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 MOV10Q9HCE1 1003 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 HRASLSQ9HDD0 168 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 SLC7A10Q9NS82 523 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 ZNF319Q9P2F9 582 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 MTFP1Q9UDX5 166 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 PIGLQ9Y2B2 252 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 MRPS28Q9Y2Q9 187 aaKnown RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 V9GYS6 101 aa3.85□□□□□ -1.79
SRP54-212ENST00000556992 COL5A1P20908 1838 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 UBR5O95071 2799 aaPredicted RBP3.85□□□□□ -1.79
SRP54-212ENST00000556992 CNOT1A5YKK6 2376 aaKnown RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 COL12A1Q99715 3063 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 PRSS44E7EML9 344 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 H3BUI4 141 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 KLK10O43240 276 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 XRCC2O43543 280 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 SSX4O60224 188 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 DOK2O60496 412 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 LMX1BO60663 402 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 PRAF2O60831 178 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 ZNF780AO75290 641 aaPredicted RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 SNRNP200O75643 2136 aaKnown RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 SNAPC5O75971 98 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 KDM4BO94953 1096 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 CRYABP02511 175 aaKnown RBP3.84□□□□□ -1.79
SRP54-212ENST00000556992 MT-ND4P03905 459 aa3.84□□□□□ -1.79
SRP54-212ENST00000556992 MELTFP08582 738 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms