RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 PRKACBP22694 351 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 MPZP25189 248 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 HSPA13P48723 471 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 RBP2P50120 134 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 ATP1B3P54709 279 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 GMFBP60983 142 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 PAX8Q06710 450 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 IL24Q13007 206 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 SCGB2A2Q13296 93 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 C6orf141Q5SZD1 244 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 STUMQ69YW2 141 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 C1orf229Q6ZS94 237 aaPredicted RBP8.89□□□□□ -0.99
LINC00239-201ENST00000556973 ANGPTL5Q86XS5 388 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 CALHM1Q8IU99 346 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 POC1AQ8NBT0 407 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR5T2Q8NGG2 359 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR51A4Q8NGJ6 313 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR5D14Q8NGL3 314 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR10AC1Q8NH08 325 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OR52N1Q8NH53 320 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 GATAD2BQ8WXI9 593 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 SEH1LQ96EE3 360 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 BORCS8Q96FH0 119 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 PKIBQ9C010 78 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 WDR13Q9H1Z4 485 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 SCN3BQ9NY72 215 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 NLKQ9UBE8 527 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 OPN4Q9UHM6 478 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 CLEC2DQ9UHP7 191 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 AUP1Q9Y679 476 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 ARHGAP32A7KAX9 2087 aa8.89□□□□□ -0.99
LINC00239-201ENST00000556973 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
LINC00239-201ENST00000556973 IGHV2-70DA0A0C4DH43 119 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 NDUFB3O43676 98 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 SYNGR1O43759 233 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ALX3O95076 343 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 MT-ND2P03891 347 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 PGA5P0DJD9 388 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 MYF6P23409 242 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 CDK5R1Q15078 307 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 LRRC10Q5BKY1 277 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 RNLSQ5VYX0 342 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ZNF788Q6ZQV5 615 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 AHSA2Q719I0 299 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 C1QL2Q7Z5L3 287 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 MKXQ8IYA7 352 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 PARP16Q8N5Y8 322 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 PNLDC1Q8NA58 520 aaKnown RBP8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ANGPTL6Q8NI99 470 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 RPS4Y2Q8TD47 263 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 NPRL2Q8WTW4 380 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 MYDGFQ969H8 173 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 DACT3Q96B18 629 aaPredicted RBP8.88□□□□□ -0.99
LINC00239-201ENST00000556973 SPSB1Q96BD6 273 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 CCL13Q99616 98 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 NUDT16L1Q9BRJ7 211 aaKnown RBP8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ANKRD60Q9BZ19 345 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ZCCHC4Q9H5U6 513 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 NEK6Q9HC98 313 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 FKBP14Q9NWM8 211 aa8.88□□□□□ -0.99
LINC00239-201ENST00000556973 ANK3Q12955 4377 aaKnown RBP8.88□□□□□ -0.99
LINC00239-201ENST00000556973 CUBNO60494 3623 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 IGKV1-27A0A075B6S5 117 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 IGKV1-9A0A0C4DH69 117 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 NKX6-3A6NJ46 265 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 PTGES3LE9PB15 166 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 ENSAO43768 121 aaKnown RBP8.87□□□□□ -0.99
LINC00239-201ENST00000556973 CDK1P06493 297 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 OCM2P0CE71 109 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 OCMP0CE72 109 aaPredicted RBP8.87□□□□□ -0.99
LINC00239-201ENST00000556973 PPIAL4GP0DN37 164 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 PSG2P11465 335 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 AMY2BP19961 511 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 AZGP1P25311 298 aaKnown RBP8.87□□□□□ -0.99
LINC00239-201ENST00000556973 C21orf33P30042 268 aaPredicted RBP8.87□□□□□ -0.99
LINC00239-201ENST00000556973 GABRA2P47869 451 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 MTCP1P56278 107 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 TAS2R43P59537 309 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 IL13RA1P78552 427 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 SMIM21Q3B7S5 101 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 IZUMO2Q6UXV1 221 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 ACP7Q6ZNF0 438 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 LHFPL2Q6ZUX7 228 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 BTN2A1Q7KYR7 527 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 NANOGP1Q8N7R0 232 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 ZNF485Q8NCK3 441 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 GPR148Q8TDV2 347 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 SMIM19Q96E16 107 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 DMRTB1Q96MA1 342 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 OPALINQ96PE5 141 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 NRIP2Q9BQI9 281 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 HES4Q9HCC6 221 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 SMURF1Q9HCE7 757 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 DHDHQ9UQ10 334 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 ERGIC3Q9Y282 383 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 ZNF281Q9Y2X9 895 aa8.87□□□□□ -0.99
LINC00239-201ENST00000556973 TPRKBQ9Y3C4 175 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms