RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 DUX4L6P0CJ89 424 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 DUX4L7P0CJ90 424 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 PGA5P0DJD9 388 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 PPIAL4GP0DN37 164 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 PIPP12273 146 aaPredicted RBP18.97■□□□□ 0.63
TDP1-216ENST00000556867 EPHA1P21709 976 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 FUT6P51993 359 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 CNN3Q15417 329 aaKnown RBP18.97■□□□□ 0.63
TDP1-216ENST00000556867 LAIR2Q6ISS4 152 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 DUX4L9Q6RFH8 374 aaPredicted RBP18.97■□□□□ 0.63
TDP1-216ENST00000556867 FAM216BQ8N7L0 139 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 OR5T2Q8NGG2 359 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 OR51A4Q8NGJ6 313 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 ANGPTL6Q8NI99 470 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 TRMT10AQ8TBZ6 339 aaKnown RBP18.97■□□□□ 0.63
TDP1-216ENST00000556867 NPRL2Q8WTW4 380 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 TMIGD2Q96BF3 282 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 PKIBQ9C010 78 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 RASSF4Q9H2L5 321 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 RASL12Q9NYN1 266 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 DUX4Q9UBX2 424 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 COL6A5A8TX70 2615 aa18.97■□□□□ 0.63
TDP1-216ENST00000556867 FAM230AA0A1W2PPH8 454 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 NKX6-3A6NJ46 265 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 OR2AT4A6NND4 320 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 ZFPL1O95159 310 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 ZNF20P17024 532 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 MYL12AP19105 171 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 TMPRSS11AQ6ZMR5 421 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 ZNF788Q6ZQV5 615 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 CALHM1Q8IU99 346 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 DNAAF1Q8NEP3 725 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 OR13C3Q8NGS6 347 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 GGHQ92820 318 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 FGGYQ96C11 551 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 TMEM80Q96HE8 168 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 GAFA1Q96PS6 74 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 PLCXD1Q9NUJ7 323 aa18.96■□□□□ 0.63
TDP1-216ENST00000556867 CNOT2Q9NZN8 540 aaKnown RBP18.96■□□□□ 0.63
TDP1-216ENST00000556867 EFCAB10A6NFE3 127 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 ECDO95905 644 aaPredicted RBP18.95■□□□□ 0.62
TDP1-216ENST00000556867 ACAA1P09110 424 aaPredicted RBP18.95■□□□□ 0.62
TDP1-216ENST00000556867 AQP4P55087 323 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 IL24Q13007 206 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 MED21Q13503 144 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 SMIM21Q3B7S5 101 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 CCDC58Q4VC31 144 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 ARMCX4Q5H9R4 360 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 OR2G6Q5TZ20 316 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 ACP7Q6ZNF0 438 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 OR5AK2Q8NH90 309 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 RPS4Y2Q8TD47 263 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 ST8SIA4Q92187 359 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 NRIP2Q9BQI9 281 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 COMMD4Q9H0A8 199 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 ZNF222Q9UK12 451 aa18.95■□□□□ 0.62
TDP1-216ENST00000556867 IGKV1D-17A0A075B6S4 117 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 IGKV1-27A0A075B6S5 117 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 IGKV1-9A0A0C4DH69 117 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 H0YHG0 523 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 SIGLEC5O15389 551 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 NDUFB3O43676 98 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 LIPFP07098 398 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 PSG2P11465 335 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 GTF2A1P52655 376 aaPredicted RBP18.94■□□□□ 0.62
TDP1-216ENST00000556867 ST3GAL4Q11206 333 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 KLF17Q5JT82 389 aaPredicted RBP18.94■□□□□ 0.62
TDP1-216ENST00000556867 BTN2A1Q7KYR7 527 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 ANGPTL5Q86XS5 388 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 OR52N1Q8NH53 320 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 UPRTQ96BW1 309 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 BORCS8Q96FH0 119 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 MED30Q96HR3 178 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 ZNF488Q96MN9 340 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 PDCD1LG2Q9BQ51 273 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 HES4Q9HCC6 221 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 PSORS1C1Q9UIG5 152 aa18.94■□□□□ 0.62
TDP1-216ENST00000556867 TRBV2A0A0J9YWF9 115 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 GPR37O15354 613 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 TCF21O43680 179 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 XPNPEP2O43895 674 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 SELLP14151 372 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 ATF1P18846 271 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 PRKACBP22694 351 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 ERVK11-1P61568 191 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 IL13RA1P78552 427 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 IKZF1Q13422 519 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 CDK5R1Q15078 307 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 LRRC10Q5BKY1 277 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 XAF1Q6GPH4 301 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 RPL22L1Q6P5R6 122 aaKnown RBP18.93■□□□□ 0.62
TDP1-216ENST00000556867 FGFRL1Q8N441 504 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 PNLDC1Q8NA58 520 aaKnown RBP18.93■□□□□ 0.62
TDP1-216ENST00000556867 SPSB1Q96BD6 273 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 MDFIQ99750 246 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 VCX3BQ9H321 246 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 CHCHD3Q9NX63 227 aaKnown RBP18.93■□□□□ 0.62
TDP1-216ENST00000556867 CLEC2DQ9UHP7 191 aa18.93■□□□□ 0.62
TDP1-216ENST00000556867 RPUSD1Q9UJJ7 312 aaKnown RBP18.93■□□□□ 0.62
TDP1-216ENST00000556867 NUP50Q9UKX7 468 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms