RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CXorf65A6NEN9 183 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PGPEP1LA6NFU8 196 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 IFITM10A6NMD0 228 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ANKRD30BLA7E2S9 258 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF878C9JN71 531 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 INAFM1C9JVW0 142 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 F5H5P2 479 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 TGFAP01135 160 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 IGHV1-46P01743 117 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 APOC1P02654 83 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 HEXAP06865 529 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CSF3P09919 207 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PSKH1P11801 424 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 IRF2P14316 349 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ANPEPP15144 967 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PAX1P15863 534 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SLC25A16P16260 332 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SELEP16581 610 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CA6P23280 308 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CDH15P55291 814 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF121P58317 390 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 GMFBP60983 142 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CXCR4P61073 352 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 HIST1H3AP68431 136 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 IL5RAQ01344 420 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF92Q03936 586 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 GK2Q14410 553 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 RSPO1Q2MKA7 263 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PCGF3Q3KNV8 242 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SNAI3Q3KNW1 292 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SPRNQ5BIV9 151 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 GLYATL3Q5SZD4 288 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 HIST2H3PS2Q5TEC6 136 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 LINC01590Q5TEZ4 76 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SLX4IPQ5VYV7 408 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CYB5R2Q6BCY4 276 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 DRAM2Q6UX65 266 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 Q6ZTK2 550 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 KCTD8Q6ZWB6 473 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 HIST2H3AQ71DI3 136 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 BIVMQ86UB2 503 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SLC35F2Q8IXU6 374 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 TIGD4Q8IY51 512 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF786Q8N393 782 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 DEFB108BQ8NET1 73 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 OR8G5Q8NG78 346 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 OR10AD1Q8NGE0 317 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 OR10S1Q8NGN2 331 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 OR8S1Q8NH09 359 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 C10orf105Q8TEF2 133 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ST8SIA4Q92187 359 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PIGCQ92535 297 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 RAB1CQ92928 201 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 YIPF5Q969M3 257 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 SGK3Q96BR1 496 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ELMOD3Q96FG2 381 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 TIMD4Q96H15 378 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 REEP6Q96HR9 211 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 AMELYQ99218 206 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CNN2Q99439 309 aaKnown RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 MROQ9BYG7 248 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 YIPF3Q9GZM5 350 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 GABARAPL1Q9H0R8 117 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PLEKHA2Q9HB19 425 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-243ENST00000556671 NKIRAS2Q9NYR9 191 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 PPP1R3CQ9UQK1 317 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 CACNG2Q9Y698 323 aa3.93□□□□□ -1.78
ATXN3-243ENST00000556671 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 DSCAML1Q8TD84 2053 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 IGLV3-9A0A075B6K5 115 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 LOC100130705A0A1B0GUX0 176 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 TMEM269A0A1B0GVZ9 245 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 hCG_1807616A0A1W2PRN6 198 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 DAPL1A0PJW8 107 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 C5orf63A6NC05 138 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 A6NIN4 97 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 ZSCAN5BA6NJL1 495 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 SNTNA6NMZ2 147 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 CD300LBA8K4G0 201 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 CLDN25C9JDP6 229 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 J3QLW9 94 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 XRCC2O43543 280 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 ENTPD6O75354 484 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 CYB5R3P00387 301 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-243ENST00000556671 KRT8P05787 483 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 ARSBP15848 533 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 ZNF19P17023 458 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 SLC2A5P22732 501 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 TUBG1P23258 451 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
ATXN3-243ENST00000556671 PSMB10P40306 273 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 CRYBB2P43320 205 aa3.92□□□□□ -1.78
ATXN3-243ENST00000556671 SRP9P49458 86 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms