RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SHHQ15465 462 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SPANXN5Q5MJ07 72 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 B4GALT1P15291 398 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 MPGP29372 298 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 EXT1Q16394 746 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 SLC36A1Q7Z2H8 476 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 TSC2P49815 1807 aa13.33□□□□□ -0.28
ARHGEF40-207ENST00000556399 A8MXK9 166 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 IAPPP10997 89 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 BRICD5Q6PL45 260 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 AKR7LQ8NHP1 331 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 RDH5Q92781 318 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 PATZ1Q9HBE1 687 aaKnown RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 WSB1Q9Y6I7 421 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 CACNA1IQ9P0X4 2223 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 AP4M1O00189 453 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 MFNGO00587 321 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 TGOLN2O43493 480 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 GALNSP34059 522 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 C2orf68Q2NKX9 166 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR10G3Q8NGC4 313 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNRF4Q8WWF5 429 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 LHX4Q969G2 390 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 NTNG2Q96CW9 530 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 OBP2BQ9NPH6 170 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 MUC1P15941 1255 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 NPBWR1P48145 328 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 LIMK1P53667 647 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 DHODHQ02127 395 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 IGSF11Q5DX21 431 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 FAM109BQ6ICB4 259 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 CCDC187A0A096LP49 1063 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 FAM24AA6NFZ4 105 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 POU2F2P09086 479 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 GLB1P16278 677 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 RCC1P18754 421 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 H3F3AP84243 136 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 RPUSD4Q96CM3 377 aaKnown RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 RAB33BQ9H082 229 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
ARHGEF40-207ENST00000556399 TNFSF11O14788 317 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 DEGS1O15121 323 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 RPS2P15880 293 aaKnown RBP13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 NCMAPQ5T1S8 102 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 PPP1R3CQ9UQK1 317 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 ICAM2P13598 275 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 IL13RA2Q14627 380 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 ZNF260Q3ZCT1 412 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR2AE1Q8NHA4 323 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 SMIM7Q9BQ49 75 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 TLNRD1Q9H1K6 362 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 SERTAD4Q9NUC0 356 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 RNF150Q9ULK6 438 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 IGKV1D-42A0A075B6H8 117 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 METTL12A8MUP2 240 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 J3QRE1 110 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 NXPH2O95156 264 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 FUT6P51993 359 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 KMT5CQ86Y97 462 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 MRPL24Q96A35 216 aaKnown RBP13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR5AC2Q9NZP5 309 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 SCN2AQ99250 2005 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 MDFIC2A0A1B0GVS7 189 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 GPR37O15354 613 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 EFSO43281 561 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 EDN3P14138 238 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 FUT3P21217 361 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 MGAT2Q10469 447 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 LTC4SQ16873 150 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 TSPO2Q5TGU0 170 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR2C3Q8N628 320 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR5C1Q8NGR4 320 aa13.31□□□□□ -0.28
ARHGEF40-207ENST00000556399 OR5H15A6NDH6 313 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 WDR1O75083 606 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 TTRP02766 147 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 HAAOP46952 286 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 ROM1Q03395 351 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 MENTQ9BUN1 341 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 ARV1Q9H2C2 271 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 ANXA10Q9UJ72 324 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 YBX2Q9Y2T7 364 aaKnown RBP13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 CYTIPO60759 359 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
ARHGEF40-207ENST00000556399 FOSL1P15407 271 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms