RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MYL12AP19105 171 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 MPZP25189 248 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 VHLP40337 213 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 RIPPLY3P57055 190 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 SLC35A2P78381 396 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 IRF3Q14653 427 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 CDK5R1Q15078 307 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 CR1LQ2VPA4 569 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 ATPAF1Q5TC12 328 aaPredicted RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 DCDC5Q6ZRR9 648 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 KCTD8Q6ZWB6 473 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 AHSA2Q719I0 299 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 ZNF676Q8N7Q3 588 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 NANOGP1Q8N7R0 232 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 BOLLQ8N9W6 283 aaKnown RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 OR51F2Q8NH61 342 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 PP6455Q8WZ26 134 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 DACT3Q96B18 629 aaPredicted RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 CDCA4Q9BXL8 241 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 WDR13Q9H1Z4 485 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 MMP26Q9NRE1 261 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 PAK1IP1Q9NWT1 392 aaPredicted RBP8.04□□□□□ -1.12
SRP54-210ENST00000556380 ERVK-18Q9QC07 812 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 CTSZQ9UBR2 303 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 RAB26Q9ULW5 256 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 PCDHB10Q9UN67 800 aa8.04□□□□□ -1.12
SRP54-210ENST00000556380 IGHV3OR15-7A0A075B7D8 119 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 TRBV2A0A0J9YWF9 115 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 PHF1O43189 567 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 AKR7A2O43488 359 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 NDUFA2O43678 99 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 SYNGR1O43759 233 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 FOXH1O75593 365 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 ALX3O95076 343 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 SERPINA3P01011 423 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 GYPAP02724 150 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 MT-ND2P03891 347 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 PGA5P0DJD9 388 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 MUC1P15941 1255 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 ATF1P18846 271 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 FUT6P51993 359 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 LCN2P80188 198 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 MED21Q13503 144 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 KCNJ8Q15842 424 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 FAM120AOSQ5T036 256 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 WDR25Q64LD2 544 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 STUMQ69YW2 141 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 DMKNQ6E0U4 476 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 ASPHD2Q6ICH7 369 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 ZNF529Q6P280 563 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 HAGHLQ6PII5 290 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 CRIP3Q6Q6R5 217 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 GLCCI1Q86VQ1 547 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 ANGPTL5Q86XS5 388 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 ZNF573Q86YE8 665 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 PARP16Q8N5Y8 322 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 DNAAF1Q8NEP3 725 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 C12orf43Q96C57 262 aaKnown RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 NEIL1Q96FI4 390 aaPredicted RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 TECTBQ96PL2 329 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 RASSF4Q9H2L5 321 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 TRIM36Q9NQ86 728 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 CHCHD3Q9NX63 227 aaKnown RBP8.03□□□□□ -1.12
SRP54-210ENST00000556380 KAAG1Q9UBP8 84 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 OPN4Q9UHM6 478 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 LRCH1Q9Y2L9 728 aa8.03□□□□□ -1.12
SRP54-210ENST00000556380 CUBNO60494 3623 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 A0A1B0GW55 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 PTGES3LE9PB15 166 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 J3QT63 122 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 GHRHP01286 108 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 CD1AP06126 327 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L2P0CJ85 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L3P0CJ86 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L4P0CJ87 422 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L5P0CJ88 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L6P0CJ89 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L7P0CJ90 424 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 RPS2P15880 293 aaKnown RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 CRHBPP24387 322 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 HAAOP46952 286 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 PITPNBP48739 271 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 ERVK11-1P61568 191 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 RPS11P62280 158 aaKnown RBP eCLIP8.02□□□□□ -1.13
SRP54-210ENST00000556380 MICBQ29980 383 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 DUX4L9Q6RFH8 374 aaPredicted RBP8.02□□□□□ -1.13
SRP54-210ENST00000556380 RNF144BQ7Z419 303 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 STX19Q8N4C7 294 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 POC1AQ8NBT0 407 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 OR8B3Q8NGG8 313 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 OR13C3Q8NGS6 347 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 ANGPTL6Q8NI99 470 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 ZNF671Q8TAW3 534 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 GHSRQ92847 366 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 MYDGFQ969H8 173 aa8.02□□□□□ -1.13
SRP54-210ENST00000556380 SMIM19Q96E16 107 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms