RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 BMXP51813 675 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 DLX1P56177 255 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 TAS2R41P59536 307 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 HIST1H3AP68431 136 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 SSBP2P81877 361 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RSPO1Q2MKA7 263 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 HIST2H3PS2Q5TEC6 136 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 ZNF826PQ6ZT77 177 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 HIST2H3AQ71DI3 136 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 MEPCEQ7L2J0 689 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CENPVQ7Z7K6 275 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 PATL1Q86TB9 770 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 ANKRD13BQ86YJ7 626 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 FGFRL1Q8N441 504 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC75AQ8NAA5 344 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 C11orf65Q8NCR3 313 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 OR9Q1Q8NGQ5 310 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 OR9I1Q8NGQ6 314 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 OR51A7Q8NH64 312 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 SLC26A7Q8TE54 656 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 TMEM255BQ8WV15 326 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 C17orf50Q8WW18 174 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RASSF5Q8WWW0 418 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 C12orf43Q96C57 262 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 DUS3LQ96G46 650 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 MED30Q96HR3 178 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 OR5M11Q96RB7 305 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 CADM1Q9BY67 442 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 POLR2J2Q9GZM3 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 HDHD2Q9H0R4 259 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 POLR2J3Q9H1A7 115 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 HEXA-AS1Q9H8Q6 139 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RNPEPL1Q9HAU8 725 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 PALMDQ9NP74 551 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 FGFR1OP2Q9NVK5 253 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 MRPL15Q9P015 296 aaKnown RBP3.87□□□□□ -1.79
ATXN3-239ENST00000556315 VAPAQ9P0L0 249 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 RIMS3Q9UJD0 308 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 NDUFAF1Q9Y375 327 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 DNAH3Q8TD57 4116 aa3.87□□□□□ -1.79
ATXN3-239ENST00000556315 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 SACSQ9NZJ4 4579 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 TRBV5-3A0A0A0MS03 114 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1B0GW55 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 PRSS37A4D1T9 235 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 A6NDX4 124 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 GGT3PA6NGU5 568 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 A6NLC8 198 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 F5H5K5 113 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 H0YAE9 185 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 H7C1C5 153 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 RHODO00212 210 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ACOT8O14734 319 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 SYNGR1O43759 233 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 SLC16A7O60669 478 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 CD14P08571 375 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ACSM4P0C7M7 580 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L2P0CJ85 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L3P0CJ86 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L4P0CJ87 422 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L5P0CJ88 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L6P0CJ89 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L7P0CJ90 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 IFI30P13284 250 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 IFNA8P32881 189 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 GGT2P36268 569 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 VDAC2P45880 294 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 LCN6P62502 163 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 BLCAPP62952 87 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 KRTAP27-1Q3LI81 207 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 WDR38Q5JTN6 314 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 PAGE3Q5JUK9 113 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ZNF626Q68DY1 528 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 HCP5Q6MZN7 132 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4L9Q6RFH8 374 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 MRPL21Q7Z2W9 205 aaKnown RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 TSEN54Q7Z6J9 526 aaKnown RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 C11orf53Q8IXP5 236 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 FAM216BQ8N7L0 139 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 Q8NFD4 153 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 LRRC29Q8WV35 223 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 H1FXQ92522 213 aaKnown RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 TAMM41Q96BW9 452 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ZBTB9Q96C00 473 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 BPIFA2Q96DR5 249 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ADAT1Q9BUB4 502 aaKnown RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DNTTIP1Q9H147 329 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 VCXQ9H320 206 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 MUC13Q9H3R2 512 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 IKZF5Q9H5V7 419 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 ABCB10Q9NRK6 738 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 DUX4Q9UBX2 424 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 PITPNC1Q9UKF7 332 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 TCF19Q9Y242 345 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 SH3GLB1Q9Y371 365 aa3.86□□□□□ -1.79
ATXN3-239ENST00000556315 LSM4Q9Y4Z0 139 aaKnown RBP3.86□□□□□ -1.79
ATXN3-239ENST00000556315 A0A1W2PQ09 198 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 CXorf65A6NEN9 183 aa3.85□□□□□ -1.79
ATXN3-239ENST00000556315 FAM90A8PA6NJQ4 464 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms