RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 WARS2Q9UGM6 360 aaKnown RBP2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 RSPH14Q9UHP6 348 aa2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 RPL26L1Q9UNX3 145 aaKnown RBP2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 STK38LQ9Y2H1 464 aa2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 KCNIP3Q9Y2W7 256 aa2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 STARD10Q9Y365 291 aa2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 CSDC2Q9Y534 153 aaKnown RBP2.23□□□□□ -2.05
EFCAB11-210ENST00000556078 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 TRAV40A0A0B4J280 105 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 DHRS7CA6NNS2 312 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 H0YHG0 523 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 AKR7A2O43488 359 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 CALUO43852 315 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 MFSD11O43934 449 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GALR3O60755 368 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SS18L1O75177 396 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SH3BGRLO75368 114 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RP2O75695 350 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SRP72O76094 671 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 LGI1O95970 557 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RENP00797 406 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IGHV3-9P01782 118 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IGHV2-5P01817 119 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 S100A9P06702 114 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ERCC1P07992 297 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RHOXF2BP0C7M4 288 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 COX5AP20674 150 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IL32P24001 234 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IL12AP29459 219 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 AGTR1P30556 359 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 HTR1FP30939 366 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 CALCRP30988 508 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SDC4P31431 198 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 HSD17B2P37059 387 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 CRYBB2P43320 205 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GPR6P46095 362 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RPL29P47914 159 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 LIM2P55344 173 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GSCP56915 257 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 PLP1P60201 277 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RPL32P62910 135 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SCRN3Q0VDG4 424 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 MRPL23Q16540 153 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 DUSP7Q16829 419 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 DEFB134Q4QY38 66 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 NHLRC3Q5JS37 347 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF506Q5JVG8 444 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 LINC00242Q5T6M2 205 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 C9orf66Q5T8R8 295 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 PLCXD3Q63HM9 321 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 TIGD3Q6B0B8 471 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 OR52E8Q6IFG1 317 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 UGT2A3Q6UWM9 527 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 Q6ZN92 141 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF620Q6ZNG0 422 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF497Q6ZNH5 498 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ARCQ7LC44 396 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 BHLHA15Q7RTS1 189 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF571Q7Z3V5 609 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GTSCR1Q86UQ5 136 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 COMTD1Q86VU5 262 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 PRR22Q8IZ63 422 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RIBC1Q8N443 379 aaPredicted RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 FNDC5Q8NAU1 212 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF740Q8NDX6 193 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 OR4F6Q8NGB9 312 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 OR13C4Q8NGS5 318 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 VN1R17PQ8TDU5 208 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ZNF721Q8TF20 911 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 UFD1Q92890 307 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 POP5Q969H6 163 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 TOMM40LQ969M1 308 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SGK3Q96BR1 496 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 TM4SF19Q96DZ7 209 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 LITAFQ99732 161 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GAL3ST1Q99999 423 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RHOXF2Q9BQY4 288 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SYT11Q9BT88 431 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 NAT9Q9BTE0 207 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 MCRIP2Q9BUT9 160 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 TM2D1Q9BX74 207 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 OR8D2Q9GZM6 311 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ANKRD19PQ9H560 264 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 LZTFL1Q9NQ48 299 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 INPP5EQ9NRR6 644 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 NUDT15Q9NV35 164 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RBM22Q9NW64 420 aaKnown RBP eCLIP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 GLS2Q9UI32 602 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SPATA2Q9UM82 520 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 SAMD4AQ9UPU9 718 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RASD1Q9Y272 281 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 RPL36Q9Y3U8 105 aaKnown RBP2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 PEX16Q9Y5Y5 336 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 ARL5AQ9Y689 179 aa2.22□□□□□ -2.05
EFCAB11-210ENST00000556078 IGLV3-16A0A075B6K0 115 aa2.21□□□□□ -2.06
EFCAB11-210ENST00000556078 TRAV9-2A0A087WT02 112 aa2.21□□□□□ -2.06
EFCAB11-210ENST00000556078 PVALEFA0A1B0GWK0 134 aa2.21□□□□□ -2.06
EFCAB11-210ENST00000556078 IQCF5A8MTL0 148 aa2.21□□□□□ -2.06
EFCAB11-210ENST00000556078 FAM25EA8MYX2 175 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms